Gene Bxe_B1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1090 
Symbol 
ID4008421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2166789 
End bp2168045 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content67% 
IMG OID637951595 
Productmajor facilitator transporter 
Protein accessionYP_554215 
Protein GI91779007 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0155468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCAA TAAGCGCAAA GCACGAACGC CGCCTGCTGT GGCTGCTCGC GCTGACGCAG 
TTCACCCTCA TCATGGACTT CATGGTGATG ATGCCGCTCG GCCCGCAGAT CATGCATGCG
TTCGCCATCA CACCGGCGGC ATTCGCCACG GCGGTGTCGG CGTACTCGTG GTGCTCGGGG
CTGTCGGGAC TCTTTGCGGC GACCTATATC GACCGCTTCG ACCGGCGCCG TCTGTTGCTG
ACCATGTATG CGCTGTTCGC GCTCTCGAAC CTGGCGTGCG CGCTGGCGAG CAGCTTTGCG
CTGCTGCTGG CCGCGCGTGC GTTCGCGGGC ATCACGGGCG GCGTGTTGGG CTCGGTGATC
ATGGCGATCG TCGGCGATGT GATCCCCGTG CAACGCCGCG GCGCCGCCAC CGGCACGATC
ATGACCGCCT TTTCCCTCGC GGCGATTGCG GGCGTGCCGG CCGGCGTGAT GCTGGGTGCG
CACTTCGGCT GGGCCGCGCC GTTCTTCCTG CTGGTGGCGC TCTCGCTGCT CGTGTGGTCG
GCGGGCTGGC GGCTGGTGCC GTCGCTGACC GAACATTTGA GCCGCCATCA GCCGCCGCTC
GCGGAAGTGC TGCCGGATTT GTGGCGGCTC CTCAGCAACC CGCGGCATCT GAATGCGTTT
GCGCTGACCT TCATGATGAT GGTCGCGCAC ATGGTGGTGA TTCCGTTCAT TTCGCCCGTG
CTGGTCGCCA ATCACGGCGT GGCGCCCGAG CAGCTATCCT GGCTCTATAT GGCCGGCGGC
GCGGCGACGT TCTTCACATC GCGCCGCGTG GGCGCGCTCG CGGACCGGTT CGGCACGCGG
CGCGTGTTCC GGATCGCGGC CGTGCTCGCG TTTCTGCCCG TGCTGTTCGT CACGCATCTG
CCGGATCTGC CGTTCTACGC GCTGGTGATG TTTTTTCCGT TCTTCATGGT CCTGATGTCG
GCGCGCATGG TACCGATGCA GGCGTTGCTG ACCACAGTCC CCGAGCCTGC CCGACGCGGC
GCTTTTCTCA GCGCGAATAG TGCGCTGCAG GCGTTGGGCA CGGGATGCGG CGCGTGGATC
GGCGGCTTGA TGCTCAGCAC GTCGCCTGGT GGACAGATTC TGGGGTATGG GACTGTCGGC
TGGGTTTCGG TTGCTGTCGG GCTGGCCGGC GTGTTCTGGG TGTCCCGGGT ACGCGGCGCG
CAAGGCGGTG CGCCTGCGGC GGGCATGCTG CATGGCGAGG CGTTCGGCGA AAGTTGA
 
Protein sequence
MYPISAKHER RLLWLLALTQ FTLIMDFMVM MPLGPQIMHA FAITPAAFAT AVSAYSWCSG 
LSGLFAATYI DRFDRRRLLL TMYALFALSN LACALASSFA LLLAARAFAG ITGGVLGSVI
MAIVGDVIPV QRRGAATGTI MTAFSLAAIA GVPAGVMLGA HFGWAAPFFL LVALSLLVWS
AGWRLVPSLT EHLSRHQPPL AEVLPDLWRL LSNPRHLNAF ALTFMMMVAH MVVIPFISPV
LVANHGVAPE QLSWLYMAGG AATFFTSRRV GALADRFGTR RVFRIAAVLA FLPVLFVTHL
PDLPFYALVM FFPFFMVLMS ARMVPMQALL TTVPEPARRG AFLSANSALQ ALGTGCGAWI
GGLMLSTSPG GQILGYGTVG WVSVAVGLAG VFWVSRVRGA QGGAPAAGML HGEAFGES