Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1090 |
Symbol | |
ID | 4008421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 2166789 |
End bp | 2168045 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637951595 |
Product | major facilitator transporter |
Protein accession | YP_554215 |
Protein GI | 91779007 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0155468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCCAA TAAGCGCAAA GCACGAACGC CGCCTGCTGT GGCTGCTCGC GCTGACGCAG TTCACCCTCA TCATGGACTT CATGGTGATG ATGCCGCTCG GCCCGCAGAT CATGCATGCG TTCGCCATCA CACCGGCGGC ATTCGCCACG GCGGTGTCGG CGTACTCGTG GTGCTCGGGG CTGTCGGGAC TCTTTGCGGC GACCTATATC GACCGCTTCG ACCGGCGCCG TCTGTTGCTG ACCATGTATG CGCTGTTCGC GCTCTCGAAC CTGGCGTGCG CGCTGGCGAG CAGCTTTGCG CTGCTGCTGG CCGCGCGTGC GTTCGCGGGC ATCACGGGCG GCGTGTTGGG CTCGGTGATC ATGGCGATCG TCGGCGATGT GATCCCCGTG CAACGCCGCG GCGCCGCCAC CGGCACGATC ATGACCGCCT TTTCCCTCGC GGCGATTGCG GGCGTGCCGG CCGGCGTGAT GCTGGGTGCG CACTTCGGCT GGGCCGCGCC GTTCTTCCTG CTGGTGGCGC TCTCGCTGCT CGTGTGGTCG GCGGGCTGGC GGCTGGTGCC GTCGCTGACC GAACATTTGA GCCGCCATCA GCCGCCGCTC GCGGAAGTGC TGCCGGATTT GTGGCGGCTC CTCAGCAACC CGCGGCATCT GAATGCGTTT GCGCTGACCT TCATGATGAT GGTCGCGCAC ATGGTGGTGA TTCCGTTCAT TTCGCCCGTG CTGGTCGCCA ATCACGGCGT GGCGCCCGAG CAGCTATCCT GGCTCTATAT GGCCGGCGGC GCGGCGACGT TCTTCACATC GCGCCGCGTG GGCGCGCTCG CGGACCGGTT CGGCACGCGG CGCGTGTTCC GGATCGCGGC CGTGCTCGCG TTTCTGCCCG TGCTGTTCGT CACGCATCTG CCGGATCTGC CGTTCTACGC GCTGGTGATG TTTTTTCCGT TCTTCATGGT CCTGATGTCG GCGCGCATGG TACCGATGCA GGCGTTGCTG ACCACAGTCC CCGAGCCTGC CCGACGCGGC GCTTTTCTCA GCGCGAATAG TGCGCTGCAG GCGTTGGGCA CGGGATGCGG CGCGTGGATC GGCGGCTTGA TGCTCAGCAC GTCGCCTGGT GGACAGATTC TGGGGTATGG GACTGTCGGC TGGGTTTCGG TTGCTGTCGG GCTGGCCGGC GTGTTCTGGG TGTCCCGGGT ACGCGGCGCG CAAGGCGGTG CGCCTGCGGC GGGCATGCTG CATGGCGAGG CGTTCGGCGA AAGTTGA
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Protein sequence | MYPISAKHER RLLWLLALTQ FTLIMDFMVM MPLGPQIMHA FAITPAAFAT AVSAYSWCSG LSGLFAATYI DRFDRRRLLL TMYALFALSN LACALASSFA LLLAARAFAG ITGGVLGSVI MAIVGDVIPV QRRGAATGTI MTAFSLAAIA GVPAGVMLGA HFGWAAPFFL LVALSLLVWS AGWRLVPSLT EHLSRHQPPL AEVLPDLWRL LSNPRHLNAF ALTFMMMVAH MVVIPFISPV LVANHGVAPE QLSWLYMAGG AATFFTSRRV GALADRFGTR RVFRIAAVLA FLPVLFVTHL PDLPFYALVM FFPFFMVLMS ARMVPMQALL TTVPEPARRG AFLSANSALQ ALGTGCGAWI GGLMLSTSPG GQILGYGTVG WVSVAVGLAG VFWVSRVRGA QGGAPAAGML HGEAFGES
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