| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1038 |
|---|
| Symbol | |
|---|
| ID | 4008473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2217300 |
|---|
| End bp | 2218307 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637951646 |
|---|
| Product | ABC sugar transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_554266 |
|---|
| Protein GI | 91779058 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.00227714 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.669846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC CTCTACGTCA CACCGGCACC GCGGCGCTCT GCGTTGCGTT GATCGCGATC
AGTTGCGCCG CGTCCGCCGC GGGCCTGAAA AGCGGTCTGA AAATCGCATT CGTGCCGAAG
CAGATCAACA ACCCCTACGA AGTGATCGCC GACGACGGCG GCATGACCGC GATCAAGGAA
TTCGGCGGCG TGGGCAAAGC GGTAGGGCCG TCGGATGCGG GCGCGTCGTC GCAAGTGCAG
TACATCAATA CGCTGATTAC GCAACGCCAG GACGCGATCG TGATCGCTGC GAACGACGCG
AATGCGGTGG TGCCGTATCT GAAGAAAGCG ATGTCGCAAG GCATCAAGGT CGTGACCTTC
GACTCGGACA CGGCGCCCGA GGGCCGGCAA CTGTTCGTCA ACCAGGCGAA TGCGGAAGGC
ATCGGCCGTG GCCAGGTTCA ACTGGTGGCC AAGCTGATGG GCGGCGAGGG TGAGTTCGCC
GTGTTGTCGG CCACGCCCAA TGCGACCAAT CAGAACACGT GGATCAAGTG GATGCAGGAG
GAACTGAAAA AGCCCGAGTA TTCGAAGATC AAGCTCGTGA AGATCGCCTA CGGTAACGAC
GACGATCAGA AGTCATTTAC CGAAACGCAA GGTCTGCTGC AGGCATATCC GAATCTGAAG
GCGATCGTCG CGCCGACCAC GGTCGGTATT GCCGCCGCCG CGCGTTATAT CTCCACTTCG
TCGAGTAAGG GCAAGGTGGC GGTGACCGGT CTCGGTACGC CGAACCAGAT GCGTGCGTTC
GTGAAGAACG GCACCGTGAA GGCGTTCCAG TTGTGGGATC CGGGTCAACT CGGCTACCTG
GCTGCTTATG CCGCGGCGGC GCTGTCTTCG GGCACGATCA GCGGTAAGGA AGGCGAGTCG
TTCGACGCCG GCAAGCTCGG CAAACGGACC ATCGGGCCGC AAGGCGAAAT CATTCTCGGA
CCGCCCACCA CGTTCGACGC GAGCAATATC GACAACTTTA ACTTCTGA
|
|---|
| Protein sequence | MFKPLRHTGT AALCVALIAI SCAASAAGLK SGLKIAFVPK QINNPYEVIA DDGGMTAIKE
FGGVGKAVGP SDAGASSQVQ YINTLITQRQ DAIVIAANDA NAVVPYLKKA MSQGIKVVTF
DSDTAPEGRQ LFVNQANAEG IGRGQVQLVA KLMGGEGEFA VLSATPNATN QNTWIKWMQE
ELKKPEYSKI KLVKIAYGND DDQKSFTETQ GLLQAYPNLK AIVAPTTVGI AAAARYISTS
SSKGKVAVTG LGTPNQMRAF VKNGTVKAFQ LWDPGQLGYL AAYAAAALSS GTISGKEGES
FDAGKLGKRT IGPQGEIILG PPTTFDASNI DNFNF
|
|---|
| |