| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1035 |
|---|
| Symbol | |
|---|
| ID | 4008476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2220463 |
|---|
| End bp | 2222013 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951649 |
|---|
| Product | ABC sugar transporter, ATPase subunit |
|---|
| Protein accession | YP_554269 |
|---|
| Protein GI | 91779061 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.474314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.672241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCAAC CCACATCCGC GGTGCCCAGG CTCGAATTGC GGCGCGCGAG TAAATCATTC
GGCCGGGTTC GCGCGCTGTC CGACGGCGAT CTCGCGCTAT GGCCGGGCGA AGTGCATGCG
CTGCTCGGCG AAAACGGCGC GGGCAAATCG ACGCTCGTGA AAATTCTCGC GGGCGTGCAT
CAGCCGGATA CCGGCGAGTT GCTGGTGGAC GGCGTGGCTC GCCGCTTCGC GACACCCGCC
GAGGCGCGCG ACGCCGGCCT CGCGGTCATC TATCAGGAGC CGACGCTGTT CTTCGATCTG
TCGATCGCGG AGAACATCTT CATGGGACGC CAACCGGTCG ACCGCATCGG CCGCATTCAG
TACGACGCGA TGCGCCGCGA GGTGGATGGC CTGCTGGCGT CGCTCGGTGT CGATCTGCGC
GCCGATCAGC TGGTGCGCGG TTTGTCGATT GCCGATCAGC AGGTGATCGA AATTGCCAAG
GCGCTGTCGC TCAATGCCAA CGTGCTGATT ATGGACGAAC CCACGGCAGC GTTGTCTCTG
CCGGAAGTGG AACGGCTTTT TGCGATCGTG CGCAAGCTGC GCGAGCGCGA CGTGGCGATC
CTGTTCATCA CGCACCGGCT CGACGAAGTA TTCGCGCTGA CACAACGCGT TACGATCATG
CGCGACGGCG CGAAAGTTTT CGACGGCCTC ACTGCCGATC TCAACACCGA ATCGATCGTT
GCAAAAATGG TCGGGCGCGA TCTGGAAACC TTCTATCCCA AGGCCGAACG CCCGCCGGGC
GAAGTGCGCC TGGCGGTGCG CGGTCTCACG CGCATCGGCG TGTTCAAGGA CATTTCCTTC
GACGTGCGCG CGGGCGAGAT CGTGGCGCTG GCCGGGCTGG TCGGCGCGGG GCGCAGCGAA
GTGGCGCGGG CGATCTTCGG CATCGATCCG CTCGATTCTG GCGAGATCTG GATTGCCGGC
GAGCGTCTGA CGGCGGGCCG GCCCGCCGCC GCGGTGCGCG CTGGACTCGC GCTGGTGCCG
GAGGATCGCC GCCAGCAAGG GCTCGCGCTG GAGTTGAGCA TCGCGCGCAA TGCGTCGATG
ACGGTGCTCG GGCGGCTCGT CAAGCATGGC CTCATCTCGA CGCGCAGCGA GACGCAACTC
GCCAGACAAT GGGGCACGCG CCTGCACCTC AAGGCGGGTG ATCCGGATGC ACCGGTCGGC
ACGTTGTCGG GCGGCAATCA GCAGAAGGTC GTACTCGGCA AATGGCTGGC AACCGGGCCG
AAAGTGCTGA TCATCGACGA ACCCACGCGT GGTATCGACG TGGGCGCCAA AGCGGAGGTG
TATGGCGCGC TCGCTGAACT GGTGCGCGAC GGTATGGCCG TGCTGATGAT CTCGAGCGAA
TTGCCGGAAG TACTCGGCAT GGCCGACCGC GTGCTGGTGA TGCACGAGGG ACGTATCAGC
GCGGATATAG CGCGTGCCGA CGCCGACGAG GAACGCATCA TGGGCGCCGC ACTTGGCCAA
CCCGTCGGCC ATCCAGTCCA ACCGATTCCA CCGCTGGGAC ACGCCGTATG A
|
|---|
| Protein sequence | MQQPTSAVPR LELRRASKSF GRVRALSDGD LALWPGEVHA LLGENGAGKS TLVKILAGVH
QPDTGELLVD GVARRFATPA EARDAGLAVI YQEPTLFFDL SIAENIFMGR QPVDRIGRIQ
YDAMRREVDG LLASLGVDLR ADQLVRGLSI ADQQVIEIAK ALSLNANVLI MDEPTAALSL
PEVERLFAIV RKLRERDVAI LFITHRLDEV FALTQRVTIM RDGAKVFDGL TADLNTESIV
AKMVGRDLET FYPKAERPPG EVRLAVRGLT RIGVFKDISF DVRAGEIVAL AGLVGAGRSE
VARAIFGIDP LDSGEIWIAG ERLTAGRPAA AVRAGLALVP EDRRQQGLAL ELSIARNASM
TVLGRLVKHG LISTRSETQL ARQWGTRLHL KAGDPDAPVG TLSGGNQQKV VLGKWLATGP
KVLIIDEPTR GIDVGAKAEV YGALAELVRD GMAVLMISSE LPEVLGMADR VLVMHEGRIS
ADIARADADE ERIMGAALGQ PVGHPVQPIP PLGHAV
|
|---|
| |