Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0987 |
Symbol | |
ID | 4008524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 2269897 |
End bp | 2271282 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637951697 |
Product | major facilitator superfamily transporter metabolite/H(+) symporter |
Protein accession | YP_554317 |
Protein GI | 91779109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.496425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTT ATGGAGCAAA CGTGGCACAG CGGCTCGATG CGCTCGAGAC CGGACCGTTT CACTGGCGGC TGCTCGGCCT GATAGGCGGC GGCATGTTCT TCGACGCATT CGACAATTTC CTTGCCGGCA GCGTGCTCGG CGCGCTCGTG CAGCAGGGTC TGTCGGACAT GCACATGAAC GCGCTATTCA TTTCGATGAG CTTTGCCGGC CTCACGCTCG GCGCGTGGGG CGCGGGCGTG ATCGGCGATC GCTTCGGGCG GCGTTTTTCG TATCAGTTCA ATCTGCTGAT CTTTGGCCTC ACCTCGATCG CGGCCGCGTT CGCGCCATCC ATGACGTGGC TGATCGTGCT GCGCTTCATC ATGGGCATCG GCCTCGGCGC GGAGATCGTG GTCGGCTATA GCACGCTCAA CGAGTTCATG CCCGCGCATG CGCGCGGTCG CTTCGCTTCA CTGCTGAACC TGATCACCAA CTCGTCGGTA CTGGTCTCGG CGGCGTGCGG CTTCCTGATC ATTCCGCATT TCGGGTGGCG CTGGATGTTC GCGATTCCCG GCATCGGCGC GCTCGTGATC TGGTATCTGC GCAAGAAAAT GCCGGAGTCG CCACGCTGGC TTGCGGCGGT AGGACGCCAT CAGGAAGCAC GCGAAGTGGT CGAGAAGATC GAAGCGCAAA GCCTGCGCCG CGACGCGCCG TTGCCGGTCG CGCCGCAGGA AGAAGAGCCC GGCCGTCTGC GCGATCTGTT CGCCGCGCGG CAGCTATCGC GCACGCTGGT CGGCATCTCG GTGATCTGTA TTTCCTTTAC GGCGATGTAT GCGTTCGTCG CCTGGGTGCC GACCTTTCTC GTCAAGCAGG GCTTCGACAT TACCCATTCC CTGCTGATCA CGTCGGCCAT GTTCGCGGGC GGGCCGGCCG GGTCGCTGAT CAGCATGGCG ATCGCCGACA GGATCGGCCG CAAATGGGGG CTCGTGATCT TCTCCGCGCT CGGAGCGATG ATCGGCATGG CGTATCCGTA CGTCACGCAT GCGGTGACGA TCGCGCTGGT CGGCTTCGGC GTGACGACGT GCATCTACGT TACCTCCGCG CTCGGCGTGG CGTGTTACGT GACCGAGCTG TTCCCAACGC GGCTGCGGCT GCGCGGTGTC GGACTCGCGA ACGCGGCGGG ACGCGCGGTC AACGTCGGCG TGCCCTACGT GGTAGCGGCC ATGTATGCAC TCGCGGGACT GCTCGGCGTG GTCTCGTTCA TCGCCGCGCT GTTCGCCTTG CTCGTCGTGA TTCTCATCAC GCTCGGCGTC GAAACCAGAC AGCGCACGCT CGAGGAAGTA CAGGCGCAGG CGGGCGGCGA CTCGGGCATC GACGTAAAGA AACCCCTCAA TATTGGAGGC ATGTAA
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Protein sequence | MSAYGANVAQ RLDALETGPF HWRLLGLIGG GMFFDAFDNF LAGSVLGALV QQGLSDMHMN ALFISMSFAG LTLGAWGAGV IGDRFGRRFS YQFNLLIFGL TSIAAAFAPS MTWLIVLRFI MGIGLGAEIV VGYSTLNEFM PAHARGRFAS LLNLITNSSV LVSAACGFLI IPHFGWRWMF AIPGIGALVI WYLRKKMPES PRWLAAVGRH QEAREVVEKI EAQSLRRDAP LPVAPQEEEP GRLRDLFAAR QLSRTLVGIS VICISFTAMY AFVAWVPTFL VKQGFDITHS LLITSAMFAG GPAGSLISMA IADRIGRKWG LVIFSALGAM IGMAYPYVTH AVTIALVGFG VTTCIYVTSA LGVACYVTEL FPTRLRLRGV GLANAAGRAV NVGVPYVVAA MYALAGLLGV VSFIAALFAL LVVILITLGV ETRQRTLEEV QAQAGGDSGI DVKKPLNIGG M
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