| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0969 |
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| Symbol | |
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| ID | 4008542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2287804 |
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| End bp | 2288583 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951715 |
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| Product | putative short-chain alcohol dehydrogenase |
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| Protein accession | YP_554335 |
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| Protein GI | 91779127 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.00190431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGGA GAACTGCACT CGTAACAGGC TCGTCGCATG GGCTGGGTCT GGCTATGGCC
GACGCACTGG CCGGCGCCGG CTGCCGGGTC GTGCTGCACG GCGTGGAAAC GCCTGAGCAG
GTCGAGCCCG CGCGCGCGGC CTTCGAGCAG AAACACGGTT ATCGCGCGGA TTATCTGCAG
GTGGACCTCG GCGATGCGCG GGCCGTCGAG CGGATGATGT TCGAGACGAT CGAGCGCGTC
GGCGCGATCG ACGTGCTGAT CAACAATGCG GTGGTGCGCC ATTTCGCGCC GATCGAAGCG
TTTCCGGTCG ACAAATGGGA GCAGGCGCTC TCCGTGAATC TGAGCGCGGC GTTTCACACC
ATCCGTCTGG CGCTGCCCGG CATGCGCGAG CGCGGTTGGG GCCGCATCTT CAATATGACC
TCGGTGTACG GCATGCGCGG CACGGCCAAT CGTGTCGATT ACGTGACCAC CAAATCCGCG
CTGCTCGGTC TGACGCGCGC GGTGGCCGCC GAAACAATGG GGCAGGGCAT TACCTGCAAC
GCGGTCTGTC CGGGCGCCGT GCATACGCCG ACCAGCGAGA ATCGCATTCA GGCGCTAATG
GAAGAAGAGA GGCTCGACCG CGAAACGGCA ATCGAGCGCT TTCTGACCGG CAAACAGCCG
ACCGGCCATT TCGTGCAGGC GTCGCATGTC GCGGATCTGG TGGTGTTCAT GTGCAGCGAC
GCGGCGGCGG AGATGACGGG CGCGATGCTG CCCGTAGATG GCGGCTGGCT GGCGACATAA
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| Protein sequence | MKGRTALVTG SSHGLGLAMA DALAGAGCRV VLHGVETPEQ VEPARAAFEQ KHGYRADYLQ
VDLGDARAVE RMMFETIERV GAIDVLINNA VVRHFAPIEA FPVDKWEQAL SVNLSAAFHT
IRLALPGMRE RGWGRIFNMT SVYGMRGTAN RVDYVTTKSA LLGLTRAVAA ETMGQGITCN
AVCPGAVHTP TSENRIQALM EEERLDRETA IERFLTGKQP TGHFVQASHV ADLVVFMCSD
AAAEMTGAML PVDGGWLAT
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