| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0954 |
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| Symbol | |
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| ID | 4008557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2306125 |
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| End bp | 2308098 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637951730 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_554350 |
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| Protein GI | 91779142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.552407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTGA TAGCCAAATT GAGGGATGCA CTGTCGGTCG CGGAACGCGA CCCCGAACTC
GTGCGTTCGC AGCTCGAAGC GTTTGGCCAC CAGGTTCCCC TTCTCTATTT CATCCTGCTG
GTCAACACGG CGGCCGTCGC GATCATGCAT GTGAATTGCG CGCCGGCATG GCTGTCGATC
TACTTTCCGG CCGCGCTGTG CGCCCTGTGC GTCGTCCGCT GCATACGATG GTGGCAATGC
CGGCACCGCG TGCTGACCGA CAACCAGGCC GTGCCCGAAC TGCGCAAGCT GACCTGGCTT
GCCGGCCTCT TCGCCATCGC ATTCAGCAGC TGGTCGCTGT TGCTGTTCCC GTACGGCACC
GCGTACGAAC AGACGCAAGT CGCGTTTTAC ATGGCGACCA CGGTTGTCGG CTGCGTGTTC
TGCCTGATGC ACCTGCGCGC GGCCGCCATG TTGCTGCTGT CGATCGTCAT CCTAAGCTTT
TCGACCTTCC TCGTTTTCAC CGGCTATCCG GTTTTCATCG CAATGGCCGT CGACATGACT
CTGGTCGGCG TCGCGCTCGC CTTCATCATT CAGCTGTATT GCCGGACTTT TGCCGACGTG
GTGCACGCGC AGCGCGAGTT GCAGGCAAGC CAGCAGAAAA CGCAGCGCCT GAGCGACGAC
AACTTCCGGC TCGCGAGCAT CGACAGTCTG ACCGACCTGC CCAACCGGCG CAGCTTCTTC
GCCTCGTTGC GCGCGCTGTC CGAACAGGCA CTCAGCAGCG GCAACGGCTT CAATGTGGGA
CTGATCGATC TCGATGGATT CAAACAGGTC AACGATATCT ACGGCCACGC GAGCGGCGAT
CTCGTTCTTC AGGAAGTCGG CTCGCGCCTG CTGTCGCTTG CGGAGCCCGG CATTTTCTTC
GCGCGGCTCG GCGGCGATGA ATTCGGCGTG CTCGCACAGC ACCAACTGGC GAACGAGACG
CTCGTCGAAT TGGGCGAGCG CATTTGCGGC GTACTCAGTC AGCCCTACCG GGTAGCGGGC
AATATCGCCG AATTGTCGGG CACCATCGGC TGGGCCGCGT TCCCCGAGGC CGGCACGACG
ATGGCGCAGG TGTTCGAACG CGCCGACACG GCGTTGTATG TCGGCAAGGA AAGCCGGCGC
GGCACGCCGG TCATCTTCTC GACCGAACAT GAAACACGGA TCCGCCGTTC GAGTCTCGTG
ACTCAGGAGC TTCGCCATGC GGACCTCGAG TCGGAACTGT TCCTGGAGTT TCAGCCGATC
CACGACGTGC TCGCACAGCG CACCATCGGT CTGGAAGCGC TTGGCCGCTG GCACAACGCG
CGGCTCGGCG CGGTCAGGCC GGAAGAGTTC ATTCGGATTG CAGAGCGTAC CGAACTGATT
CTGCGCATCA CGGAAGTGCT GCTGCACAAA GCGCTCGACG AAGTGGCGCG CTGGCCGCCG
GAGCTTTATC TGTCGTTCAA TCTGTCGGCG ATCGATATCT GTACGTCGGC ACGCGCCCGC
CGCCTGATCG ATATCGTCAT GGCAAGCGGC GTGCCGCCGC ATCGTGTGTC GTTCGAGATC
ACCGAGACGG CGGTGACGCG CGATTTCGAA CAGGCGCGCT GTTCGCTCAC CGTGATCAAG
AAAGCGGGCT GCCGCGTGTC GCTCGACGAT TTCGGCACCG GGTATTCAAG TCTTAGCTAC
GTGCATCGCC TGCCCTTCGA TACGATCAAG ATCGATCGCA GCTTCATGAC GGACGTGGAC
TCCAACAGCG CTTCGAAAAA GATCGTCAAG TCGGTGCTCG ACCTGTGCCG CAATCTGGGA
CTCGAATGCG TGGTGGAAGG ACTCGAGACG GCATCGCAAG TCGAGGTCGT CAAGGCGCTC
GGCGCCCGCG CGATGCAGGG CTATCTGTTC AGCCGGCCGA TGCGGGCAAG CGCCGTCGCC
GAGTATCTGC ATACGACGCG CGGGCAGGAC TACGCTGTGC AAACGCTGTC GTAG
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| Protein sequence | MVLIAKLRDA LSVAERDPEL VRSQLEAFGH QVPLLYFILL VNTAAVAIMH VNCAPAWLSI
YFPAALCALC VVRCIRWWQC RHRVLTDNQA VPELRKLTWL AGLFAIAFSS WSLLLFPYGT
AYEQTQVAFY MATTVVGCVF CLMHLRAAAM LLLSIVILSF STFLVFTGYP VFIAMAVDMT
LVGVALAFII QLYCRTFADV VHAQRELQAS QQKTQRLSDD NFRLASIDSL TDLPNRRSFF
ASLRALSEQA LSSGNGFNVG LIDLDGFKQV NDIYGHASGD LVLQEVGSRL LSLAEPGIFF
ARLGGDEFGV LAQHQLANET LVELGERICG VLSQPYRVAG NIAELSGTIG WAAFPEAGTT
MAQVFERADT ALYVGKESRR GTPVIFSTEH ETRIRRSSLV TQELRHADLE SELFLEFQPI
HDVLAQRTIG LEALGRWHNA RLGAVRPEEF IRIAERTELI LRITEVLLHK ALDEVARWPP
ELYLSFNLSA IDICTSARAR RLIDIVMASG VPPHRVSFEI TETAVTRDFE QARCSLTVIK
KAGCRVSLDD FGTGYSSLSY VHRLPFDTIK IDRSFMTDVD SNSASKKIVK SVLDLCRNLG
LECVVEGLET ASQVEVVKAL GARAMQGYLF SRPMRASAVA EYLHTTRGQD YAVQTLS
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