| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0951 |
|---|
| Symbol | |
|---|
| ID | 4008560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2310233 |
|---|
| End bp | 2311483 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637951733 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_554353 |
|---|
| Protein GI | 91779145 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.161729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCG CTAACAGCAA ACGCTTCGCC CCCGCGTTCA ACCAGACGAC GCTGGTGATC
CTCGCCGGCG CGATCATTCT CAGCGCCGCG ATGGGCATCC GGCAGACCTT CGGCCTGTTC
ATCGGCCCGT TTTCATTCGA CCGCGGTCTG CCGGTCACGC TGATCGCGTT CGCGATCGCG
CTGCACAATC TGGTGTGGGG TTTTGCCCAG CCGTTCGCGG GCGCCGCTGC GGATCGCTAT
GGTTCAGCGC CCGTGGTCGC GTTCGGCGCG ACCACTTTCG CGGCCGGGCT CGGCCTCGCG
GCAGTGGCGC CCAGCGGCGC CATGCTGATC GTCGGCATGG GACTGCTGGT GGGCATCGGC
GTGAGTTGCA CGACCTTCGG CGTGGTGCTG CCGGCAGTGG GCCGCATCGC CTCGCCGGAA
AACCGCAGCA TGGCGATGGG TCTGGTCAGC GCCGGCGGCT CCGCGGGCCA GGTACTGATG
GTCCCGCTCG TGCAAGGCGT CCGGCTCAGC TCGGGCATCG CCACGTCGCT CTTCGTGCTG
GCGTTCGTGA TGCTGCTGAT CGCCCCGCTC GGCATGGTGC TCGACCGGCG CGCGCGGGTC
GGTACACCGC GTCAGGAAGC GCCGGTCGCG CCGCTTCGCC AGGTACTCGG CCAGGCGGCC
CGGCATCGCG GCTACCTGCT GCTGACACTC GGCTTCTTCA CTTGCGGTTT CCAGCTTGCG
TTCATTGCCA CGCATCTGCC GGAATATCTG TCGCTTTGCC ATATGCCGAT CGGACTCGGC
GCCACCGCCC TCGCGCTGAT CGGCCTGTTC AATATGGCGG GCAGCTGGGC CTGCGGCTGG
CTCGGCGGCC GTTACCGGCA GCATCATGTG CTCGGCTGGC TTTATCTGAT CCGCAGCGCG
ACGATCGGGG CCTTCTTCCT GCTGCCGAAA ACCCCTGCTT CGGTCGTGAT CTTCGCGGCG
GTGATGGGTC TGACCTGGCT CGGCACCGTG CCGCTCACGA GCGGACTGGT CGCCAAAGTG
TTCGGCACGC GCCACCTCGG CAGCCTGTTC GGGCTGTGCT TTCTGAGCCA TCAGATCGGC
TCCTTTCTCG GCGCGTGGCT GGGCGGCCTG GTGTTCGATC TCACCGGCTC GTATTCGCTG
CTGTGGGAAG CGACCGTGGT GGCGGGGCTC GTTGCCGCGA TGCTGCACTT CCCGATCGAC
GACACCACGG TGAGCACGCC CGCGCTTCGG GCCGAGCCGG CGGCGGCGTG A
|
|---|
| Protein sequence | MSTANSKRFA PAFNQTTLVI LAGAIILSAA MGIRQTFGLF IGPFSFDRGL PVTLIAFAIA
LHNLVWGFAQ PFAGAAADRY GSAPVVAFGA TTFAAGLGLA AVAPSGAMLI VGMGLLVGIG
VSCTTFGVVL PAVGRIASPE NRSMAMGLVS AGGSAGQVLM VPLVQGVRLS SGIATSLFVL
AFVMLLIAPL GMVLDRRARV GTPRQEAPVA PLRQVLGQAA RHRGYLLLTL GFFTCGFQLA
FIATHLPEYL SLCHMPIGLG ATALALIGLF NMAGSWACGW LGGRYRQHHV LGWLYLIRSA
TIGAFFLLPK TPASVVIFAA VMGLTWLGTV PLTSGLVAKV FGTRHLGSLF GLCFLSHQIG
SFLGAWLGGL VFDLTGSYSL LWEATVVAGL VAAMLHFPID DTTVSTPALR AEPAAA
|
|---|
| |