| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0940 |
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| Symbol | |
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| ID | 4008571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2323302 |
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| End bp | 2324423 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637951744 |
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| Product | ABC putrescine transporter, periplasmic ligand binding protein PotF |
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| Protein accession | YP_554364 |
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| Protein GI | 91779156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.147346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.325606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTA GTCATCTTCG TCATGCGGTC GCGGGGGCCG CGCTTCTCGC CTTCACCGGC
TTTGCGGCGC TGTCGGTCAC GCCGGCCCTT GCGGCCGACA CGGAACTGAA TGTGTACAAC
TGGTCGGACT ACATCGCGAA AGATACGATT CCGAACTTCG AGAAGCAGGA CGGCATCAAG
GTCAAATACG ACAACTACGA TAGCGACGAC ACGTTGCAGG CCAAACTGCT GGCGGGCAGC
TCCGGCTACG ACATCGTGGT GCCCACGTCT AATTACATGG CCAAGCAGAT TCAGGCCGGC
GTGTACCAGA AGCTCGACAA ATCGAAGTTG CCGAATCTCG CCAATCTCGA CCCCGTGCTC
ATGAAGATGA TCGCCGACGC GGACCCGGGC AACCAGTACG GGGTGCCTTG GGCATACGGT
ACGGACGGCA TCGGCTATAA CGTGCAGGCG GTGCAGAAAG CGCTCGGCGC CAATGCGCCG
GTGGATAGCT GGGCACTGAT CTTCGATCCG GCCAATCTCT CCAAGCTGAA AGGCTGCGGC
GTCTCGATCC TCGACCAGGC CGTCGACGTC TTCGCCGCCA CGCTGCAATA CATGCACAAG
GATCCGAACA GTACGAATCC CGCCGACTAC CAGGCCGCAT TCGAAGTGCT GAAGAAGATT
CGTCCGTATA TCACCCAGTT CAATTCGTCG GGCTACATCA ACGACCTCGC CAACAACGAC
GTGTGCGTGG TGCTGGGCTG GTCCGGCGAC GTCGGTATCG CGAGCCGCCG TACCGAAGAA
GCCAAGCGTT CGTATCAGAT CAAGTTCTCG AACGTGAAGG AAGGCGGCCT GCTGTGGTTC
GACGTGATGG TGATCCCGAA AGACGCGCCG CATCCCGAAG CCGCGCTGAA ATGGATCAAC
TACATCTCGG ACCCGAAGGT CAACGCCGCG ATCACCAACG AAGTGTTCTA CCCGACCGCG
AACAAGGCCG CGCGCCAGTT CGTCACACCG GCTGTCGCAC AGGACAAGAC CGTTTATCCG
GGCGATGAAG TGTTGAGCAG GATGACGCTG ATGAAGCCGA TGCCGACCGA CATTCTGCGC
CTTGAAAACC GCCTTTGGGC GCAGCTCAAA ACCGGCCATT AA
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| Protein sequence | MSVSHLRHAV AGAALLAFTG FAALSVTPAL AADTELNVYN WSDYIAKDTI PNFEKQDGIK
VKYDNYDSDD TLQAKLLAGS SGYDIVVPTS NYMAKQIQAG VYQKLDKSKL PNLANLDPVL
MKMIADADPG NQYGVPWAYG TDGIGYNVQA VQKALGANAP VDSWALIFDP ANLSKLKGCG
VSILDQAVDV FAATLQYMHK DPNSTNPADY QAAFEVLKKI RPYITQFNSS GYINDLANND
VCVVLGWSGD VGIASRRTEE AKRSYQIKFS NVKEGGLLWF DVMVIPKDAP HPEAALKWIN
YISDPKVNAA ITNEVFYPTA NKAARQFVTP AVAQDKTVYP GDEVLSRMTL MKPMPTDILR
LENRLWAQLK TGH
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