Gene Bxe_B0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0937 
Symbol 
ID4008574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2326770 
End bp2327681 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID637951747 
ProductABC putrescine transporter, inner membrane subunit PotI 
Protein accessionYP_554367 
Protein GI91779159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.023039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.311866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC CTAACAAGAC GCTTTCCAAT AGCGTGCTGA CGTTCGGATT CCTGTTTCTC 
TACATTCCGA TCATCAGCCT CGTGGTGTAC TCGTTCAACG AATCGAAGCT CGTCACGGTA
TGGTCCGGCT TTTCCCTCAA ATGGTACGGC GCGCTGTTGC ACGACGGCGA ACTGCTGAAC
GCGGCATGGC TTTCGTTGAA GATCGGTCTG CTGACCGCGT GCGCCTCCGT TGTGATCGGC
ACGTGGGCCG GTTTCGTGCT CGCGCGCTTC GGACGCTTTC GCGGCTTCAC GCTGTTCGCC
GGCATGATCA ACGCGCCGCT CGTGATTCCT GAAGTGATTC AGGGTATCTC GCTGCTGCTG
CTGTTCGTCG CACTCGAACA GATGCTCGGC TGGCCGAAGG GGCGCGGTCT CTTCACGATC
TGGATCGGCC ACGTGATGCT GTGCGTGTCG TATGTGGCGA TCGTCGTGCA ATCGCGTGTG
AAAGAGCTGA ACAAGTCGCT CGAAGAAGCC GCGCTCGATC TCGGCGCCAC GCCATTCAAG
GTGTTCTTCC TGATCACCCT GCCGCTGATC TCGCAGGCGC TGATGTCCGG CTGGCTGCTG
TCGTTCACGC TTTCTTTCGA CGACCTCGTA CTCTCCGCAT TCCTGTCCGG GCCGGGCTCG
ACCACGCTGC CGCTCGTCGT GTTCTCGCGT GTGCGCCTCG GCCTGAATCC GGAAATGAAT
GCACTCGCCA CGATCTTCAT CACCACGGTG ACGATCGGCG TGATTGCCGT GAACCGCTGG
ATGCAGTTGC GCGAGCGCAA ACGCAACCGC GACATGCAGA TGGCTTTTGC GCTTGCCGAA
GCCGCAGATC CCTTGCCCTC CGCTCCACAA CAAGCCGCCG TACGGAAGTC GCTCGATACG
GCACGTGCAT AA
 
Protein sequence
MIKPNKTLSN SVLTFGFLFL YIPIISLVVY SFNESKLVTV WSGFSLKWYG ALLHDGELLN 
AAWLSLKIGL LTACASVVIG TWAGFVLARF GRFRGFTLFA GMINAPLVIP EVIQGISLLL
LFVALEQMLG WPKGRGLFTI WIGHVMLCVS YVAIVVQSRV KELNKSLEEA ALDLGATPFK
VFFLITLPLI SQALMSGWLL SFTLSFDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATIFITTV TIGVIAVNRW MQLRERKRNR DMQMAFALAE AADPLPSAPQ QAAVRKSLDT
ARA