| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0912 |
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| Symbol | benD |
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| ID | 4008599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2356082 |
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| End bp | 2356870 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951772 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_554392 |
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| Protein GI | 91779184 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.609655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGT CCAACAAACG CTTCACTGAA AAAGTCGTGA TCGTCACCGG CGCGGCGCAA
GGTATCGGCC GTGGCGTTGC GCTGCGCGCG GCAGCCGAAG GCGCGATCGT CGTGCTCGCC
GATCGCGCCG AACTCGTGCA CGAAGTGGAG GCGGAGATCG CCGCGCTCGG CAGCCCCTCG
CTCGCCGTGA TCGCCGATCT GGAAACCTAT GCCGGCGCGT GCAAGCTGAT GCGGGCGGCG
CTCGATGCCT TCGGCAAGAT CGACGTGCTG ATCAACAACG TGGGCGGCAC GATCTGGGCC
AAACCGTACG AAGAGTATGA GGAAGCGCAG ATCGAAGCCG AAGTGCGCCG CTCGCTGTTC
CCCACCTTGT GGAGCTGCCG TGCGGTGTTG CCCGCCATGA TCGCGCAGCG GCGCGGCGCG
ATCGTCAATG TATCGTCGAT TGCCACGCGC AGTATCTATC GCGTGCCTTA TGCGGCGTCC
AAAGGCGGTG TGAACGCGTT GACGGCCAGC CTCGCCTTCG AACATGCGGA CGACGGCATT
CGCGTGAACG CCGTCGCCAC CGGCGGCACC GAAGCGCCGC CGCGCAAGGT GCCGCGCAAT
ACCGCACCGC AGAGCGAACA GGAAGCGCGC TGGTATCGAG GCATCGTCGA TCAGACCATC
GCTTCGAGTT TGATGCGCCG TTACGGCACC ATCGATGAAC AGGTCGGCGC GATTCTGTTT
CTCGCCTCGG ACGAGGCGTC GTACATCACC GGCACCGTGT TGCCGGCAGG CGGTGGCGAT
CTCGGGTAG
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| Protein sequence | MTSSNKRFTE KVVIVTGAAQ GIGRGVALRA AAEGAIVVLA DRAELVHEVE AEIAALGSPS
LAVIADLETY AGACKLMRAA LDAFGKIDVL INNVGGTIWA KPYEEYEEAQ IEAEVRRSLF
PTLWSCRAVL PAMIAQRRGA IVNVSSIATR SIYRVPYAAS KGGVNALTAS LAFEHADDGI
RVNAVATGGT EAPPRKVPRN TAPQSEQEAR WYRGIVDQTI ASSLMRRYGT IDEQVGAILF
LASDEASYIT GTVLPAGGGD LG
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