| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0911 |
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| Symbol | |
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| ID | 4008600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2356884 |
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| End bp | 2359028 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951773 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_554393 |
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| Protein GI | 91779185 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.55611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA AGCAGCTCGC GTTCCCTATC GACGACATCA ACCGGCACGC CGTCGCGTTG
TTCTCAGCCG GACGATTCGC CGAGGCTTTG TCGATGGTAA CGCCCCTGCT GGAAGATGAT
GCACTGCCGG CCGGCGCGCG GGCCGACGCG TTGAATATCG CCGGCGCGTG TTGTTTCGCG
TTGCAGCGGC ACACGGATGC GGAACACCAC TGGCGCCGCT GTCTGCGCAT CAAACCCGGC
TACGCGGAGG TGTACGGCAG CCTCGGCATG CTGCTCAGGT CACTAGGGCG CCTGTCCGCA
GCCAAGGCAA TGTACCGGCA ACTGGTCGCA TTGCAGCCGG CCCACGCCGA CGCCCGCAAT
CATCTCGGCG CCGTGCTTTA CGGCCTCGGC TACAAGGAGG AGGCGGAGGC GTCCTATCGC
GAGGCGCTGG TGCTTCGTCC CGGCTACGCC GAAGCTCACT ACAACCGCGG CATCGTGTTG
CACGAACTGG GCCGCCTGCA CGAAGCGGAA GCGGCGTTTC GCCACGCCGT GCCGGGACTG
CCTGGCCATG CCGAAGTCCA TAACAATCTG GGCAACGTGC TGACGGAACA GGGCCGTTTC
GCCGAAGCGG ACGCTGCCTA CCGCGAGGCG CTGGCAATCC GGCCGCATTA TCCCGAGGCG
CTCAATAACC TCGGCGGTGT CCTGAAGGCC ACCTTCCGTC TCGCCGAAGC CGAGCTGGCT
TTTCGCCTTG CGCTTGCCAT TCGTGCGGAT TACGCGGAAG CCCACCTGAA TCTCGGCACG
GTGCTCGCTG ATCTCGAACG CTTGCCCGAA GCAGAAGCCG CCTATCGCGA AGCAATCTCG
CACCGTCCCG ACTACGCTGA AGCCCACTAC AACCTCGGTG TGACGATGGG CAGGCGGGAG
CAACTGTTCG AAGCCGAAAT GGCTTACCGC GAGGCGATCC GCCTGCGGCC CGATCTCGTT
CATGCGTATA ACAACCTGGG TTGCGTGCTG CGCCGGCTCG ATCGTCTGAC GGCGGCTGTC
GAGGCTTTCA GGCATGCGCT CCGCATGTGC CCGGATCTGG CCGAGGCGCA CTACAACCTT
GGCGCGGCGT TGGCGCAGCT CATGCAACTG TCCGAGGCGG AAAACGCGTA TCGCCGGGCG
CTCGCTTTAC GTGCCGATTA CGGCGACGCG AGATTCGGGC TGGCCGTGCT GCTGCTCGGC
ATGGGCCGCT TCGAAGAGGG GTGGCGCCTG TACGAGTGCC GCTACGAGCA GCGCGCCTTC
GTCCATTACA GGACCGCTTC GATGCTGGGC TGTCCGCAAT GGCAGGGCGG CCCGCTCGAC
GGCAAGTCCC TGCTGGTGTG GCAGGAAGAC GGCCTTGGCG ACATGATCCA GTTCAGCCGC
TATTTTGCCT TGTTGAAGGC ACAGGGCGCC TCGCACATCA CGTTTGCATG CGCGCCCTCG
CTGCACAGGC TGATGGGTCG GGTCGACGGT GTGGATGCCG TGCTCGATCA CGACACCGCT
CGCGCACACC CGGCGGCTTA CGACTGCTGG ACGAGCCTGC TGAGCGCGCC GCTGCATCTG
CGTACGAGCG TGGATACGAT TCCGCGCCCC GTGCGTCTCA CAGCGGAGCC GTCGCTGATT
GATCGCTGGC GGTCGCTGCT GGATGCACTG CCGCCCGGCC GCAAGATCGG TCTGGTGTGG
AAGGGCAACG CAAACCATCA CAACGACGCG AACCGGTCGA TTCCCTCGCT CGCCATACTG
GCGCCGCTCT GGAGCGTGCC CGGCGTGAGT TTCGTGAGTC TGCAGAAAGG ACAGGGCGAG
GAAGAAGCGA GACATCCTCC CGCCGGGCAG CCGCTGCTCG ACGTTGGATC GCGCGTGACG
GATTTCGCGG ACAGTGCCGC GATCATCGCG CAACTCGATC TGGTGATTGC CGTGGATACG
TCCACCGCGC ATCTGGCCGC GTCGCTCGGC ACACCGTGCT GGGTGATGCT GCCGGAAAAA
GATATCGACT GGCGCTGGAT GCATGAACGC AGCGATTCGC CGTGGTATCC GCACACGCTG
CGCCTGTTCC GCCGCGCGCC GGGTGAAGAT TGGTCGATGC CGGTCGAGCG GGTGAGACAG
GCGTGCTTGG AGCGGTTCGC CGACGCGGAC CGCGCGCCCA CCTGA
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| Protein sequence | MTDKQLAFPI DDINRHAVAL FSAGRFAEAL SMVTPLLEDD ALPAGARADA LNIAGACCFA
LQRHTDAEHH WRRCLRIKPG YAEVYGSLGM LLRSLGRLSA AKAMYRQLVA LQPAHADARN
HLGAVLYGLG YKEEAEASYR EALVLRPGYA EAHYNRGIVL HELGRLHEAE AAFRHAVPGL
PGHAEVHNNL GNVLTEQGRF AEADAAYREA LAIRPHYPEA LNNLGGVLKA TFRLAEAELA
FRLALAIRAD YAEAHLNLGT VLADLERLPE AEAAYREAIS HRPDYAEAHY NLGVTMGRRE
QLFEAEMAYR EAIRLRPDLV HAYNNLGCVL RRLDRLTAAV EAFRHALRMC PDLAEAHYNL
GAALAQLMQL SEAENAYRRA LALRADYGDA RFGLAVLLLG MGRFEEGWRL YECRYEQRAF
VHYRTASMLG CPQWQGGPLD GKSLLVWQED GLGDMIQFSR YFALLKAQGA SHITFACAPS
LHRLMGRVDG VDAVLDHDTA RAHPAAYDCW TSLLSAPLHL RTSVDTIPRP VRLTAEPSLI
DRWRSLLDAL PPGRKIGLVW KGNANHHNDA NRSIPSLAIL APLWSVPGVS FVSLQKGQGE
EEARHPPAGQ PLLDVGSRVT DFADSAAIIA QLDLVIAVDT STAHLAASLG TPCWVMLPEK
DIDWRWMHER SDSPWYPHTL RLFRRAPGED WSMPVERVRQ ACLERFADAD RAPT
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