| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0874 |
|---|
| Symbol | |
|---|
| ID | 4008637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2397752 |
|---|
| End bp | 2398708 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637951810 |
|---|
| Product | putative proline racemase |
|---|
| Protein accession | YP_554430 |
|---|
| Protein GI | 91779222 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.392483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA TGAAAACCTT GGACATCATC GACTCGCACA CCGGCGGTGA ACCGACCCGC
CTCGTGGTGT CGGGCGGCCC GGATCTCGGC GGCGGCACAC TGGCGCAACG GCTCGACGTA
TTGCGCACAG GGTTCGACGA ATGGCGCGCG GGCGTCGTCA CCGAACCGCG CGGCTCGGAC
GTCATGGTGG GCGCGCTGCT CTGCGAGCCG GACGACCCGA CCTGCGCCGC CGGCGTGATC
TTTTTCAACA ACGTCGGCTA TCTCGGCATG TGCGGGCACG GCACGATCGG TCTCGTCGTC
TCGCTGGCGC ACCTGGGGCG GATCGGGCCG GGGCGTCACC GCATCGAGAC GCCGGTCGGC
GTCGTCGAAG CGACGCTCAA CGAGGACGGC AGCGTCGCCG TGCGCAACGT GCCGGCCTAT
CGCTATCGCG AGTCCGTGCG GGTGGACGTG CCGGGCCACG GCGTGTTGAC CGGCGATATC
GGCTGGGGCG GCAACTGGTT CTTTCTCGTG GCCGACCACG GGCGCGCGCT GGAGGCATCG
CGTATCGGCG AATTGACGGC GTTCAGCGGA GCGATCCGCG ACGGGCTGAT CGCGCAGCGC
ATCACCGGCG CGGAGGGCGC GCTGATCGAT CACATCGAAC TCTTCGGACC CGCTTCGCGT
GACGGTATCG ACAGCCGCAG CTTCGTGCTG TGTCCCGGCA ACGCGTACGA CCGCTCGCCG
TGCGGCACCG GCACGAGCGC CAAGGTGGCC TGTCTCGCGG CCGACGGCAA ACTGGCCGAA
GGCGCGGTGT GGCGGCAGGA GAGCATTATC GGCAGCGTGT TCGAGGCGAG CTATCGCCAT
GCCGGCGATG GCGTCCATGT GATTCCCACC ATTACCGGCC ACGCGTACAT CACGGCGCAG
GCGCGCCTGT GCTTCGACGA GCGCGATCCC TTTGCCTGGG GCATCCGCAC GGCATGA
|
|---|
| Protein sequence | MSTMKTLDII DSHTGGEPTR LVVSGGPDLG GGTLAQRLDV LRTGFDEWRA GVVTEPRGSD
VMVGALLCEP DDPTCAAGVI FFNNVGYLGM CGHGTIGLVV SLAHLGRIGP GRHRIETPVG
VVEATLNEDG SVAVRNVPAY RYRESVRVDV PGHGVLTGDI GWGGNWFFLV ADHGRALEAS
RIGELTAFSG AIRDGLIAQR ITGAEGALID HIELFGPASR DGIDSRSFVL CPGNAYDRSP
CGTGTSAKVA CLAADGKLAE GAVWRQESII GSVFEASYRH AGDGVHVIPT ITGHAYITAQ
ARLCFDERDP FAWGIRTA
|
|---|
| |