| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0865 |
|---|
| Symbol | |
|---|
| ID | 4008646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2405610 |
|---|
| End bp | 2406074 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951819 |
|---|
| Product | RbsD or FucU transport |
|---|
| Protein accession | YP_554439 |
|---|
| Protein GI | 91779231 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4154] Fucose dissimilation pathway protein FucU |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.191121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAAGA ATCTGGACCC GCTGCTCAAT GCCGACATAC TGTATGCGCT ACGCTCGATG
GGCCACGGCG ACGAACTCAT CATTTGCGAC GCCAACTTTC CGGGCGACTC GGTCGCGCGC
GAGAGCGTGC TGGGCAAACT GCTTCGCCTC GACGGCGTGA GCGCGCCGCG CGCGATTCGC
GCGGTTCTCT CGGTGATGCC GCTGGATACG TTCATCGAAC ACCCGGCGTC GCGCATGGAG
GTGGTCGGCG AACCACACAC GCTTCCGGCC GTGCAGCGGG AAGCACAAAC CGAAGTCAAC
GCCGCGGAGG GGCGCGATGT GCCGTTCGCG CCGATCGAGC GGTTTGCGTT TTATGAGCGG
GCGCGCAAAG CGTATTGCGT GATCGCCACC GGCGAAGCGC GCGGTTACGG TTGCTTCGTG
TTCACGAAGG GCGTTCTGCT CGCTCCGGAC GCGCCGCAGT CGTAG
|
|---|
| Protein sequence | MLKNLDPLLN ADILYALRSM GHGDELIICD ANFPGDSVAR ESVLGKLLRL DGVSAPRAIR
AVLSVMPLDT FIEHPASRME VVGEPHTLPA VQREAQTEVN AAEGRDVPFA PIERFAFYER
ARKAYCVIAT GEARGYGCFV FTKGVLLAPD APQS
|
|---|
| |