| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0850 |
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| Symbol | |
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| ID | 4008661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2418915 |
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| End bp | 2422100 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637951834 |
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| Product | RND family hydrophobe/amphiphile efflux pump |
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| Protein accession | YP_554454 |
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| Protein GI | 91779246 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.033039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00102824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACATAT CCAAATTCTT CATCGATCGG CCGATCTTTG CCGGCGTGCT ATCGGTATTG
ATCCTGCTGG CGGGCGTGAT TTCGCTCTTC AAGCTGCCGA TCTCGGAGTA TCCGGAAGTC
GTGCCGCCTT CGGTGGTGGT GCACGCGCAG TATCCGGGTG CAAATCCGAA GGTGATCGCC
GAAGCGGTCG CTTCGCCGCT CGAAGAGCAG ATCAACGGCG TCGAGAACAT GCTGTACATG
CAGTCGCAAG CGAATAGCGA CGGCAATCTC ACGCTCACGG TGACCTTCAA GCTCGGCACC
AATCCGGACC TCGCGACGCA ACTGGTGCAG AACCGCGTCA ACCAGGCGCT GCCGCGTCTG
CCGGAAGACG TGCAGCGTCT GGGCATCACG ACGATCAAGA GCTCGCCCAC GCTGACTATG
GTGGTCCACC TGATCTCGCC GAACAATCGC TACGACATGA CGTATCTGCG CAACTACGCG
CTGCTGAACG TCAAGGACCG GCTTGCGCGG ATTCAGGGTG TGGGCGAAGT GCAGTTGTGG
GGTTCGGGCG ATTACGCCAT GCGCGTCTGG CTCGATCCGC AGAAAGTGGC CCAGCGCGGT
TTGACGGCGA CCGAAGTGGT CAACGCGATC CGCGAGCAGA ACATTCAGGT GGCGGCCGGT
GTGATCGGCG CATCGCCTTC GGTGCCGGGC ACGCAGTTGC AGTTGTCGGT GAATGCGCGC
GGCCGTTTGA GGACCGAGGG CGAATTCGGC GACATCATCG TCAAGACCGC GCCGGATGGC
GGCGTGACCT ATCTGCGCGA TATTGCACGA ATCGAACTCG CGGCGTCGGA ATACGGCCTG
CGTTCGCTGC TCGACAACAA GCCGGCTGTG GCGCTCGCCA TCAACCAGGC GCCGGGCGCG
AACTCGCTCG CCATTTCCGA TCAGGTGCGC TCCGCGATGA AGGAACTCGC GGAAGACATG
CCGGCAGGCG TCGAATACAA GATCGTCTAC GACCCGACGC AGTTCGTGCG CTCGAGTATC
GAGGCAGTCG TGCATACGCT GCTCGAAGCG ATCGCGCTGG TGGTGATCGT CGTGATCGTG
TTCCTGCAAA CGTGGCGCGC GTCGATCATT CCGCTGATCG CCGTGCCGGT GTCGATCGTG
GGGACGTTCT CGCTGCTGCT CGCGTTCGGT TTCTCGATCA ACGCGTTGTC GTTGTTCGGC
ATGGTGCTCG CCATCGGGAT CGTGGTGGAC GATGCGATCG TGGTGGTGGA GAACGTTGAG
CGGAACATCG AAAACGGGCT GAGTGCGCGC GACGCCACCT ATAAGGCCAT GCAGGAAGTG
AGCGGGCCGA TTATCGCCAT TGCGCTGACA CTGGTTGCCG TGTTCGTGCC GCTCGCGTTC
ATGACCGGTT TGACGGGCCA GTTCTACAAG CAGTTTGCGA TGACCATCGC GATTTCGACG
GTGATCTCGG CGTTCAATTC GCTGACGCTG TCGCCGGCGC TGTCCGCGAT GCTGTTGCGC
AGTCATGGTG CGAAGGAAGA CTTCGTGACG CGCGTGATGA ATCGCCTGCT GGGTGGTTTC
TTCAGGCGTT TCAACAAGGT GTTTCATCGT GGCTCGGCGG AATATGGCCG CGGCGTGACC
GGCGTGTTGC GTCGTAAGGG CGCCATGCTC GCGGTGTACG CCATCCTGCT GGGCGCGACC
GTGCTGATCT CGCGCGTGGT GCCGGGCGGT TTCGTGCCGG CGCAGGACAA GGAGTACCTG
ATTGCGTTCG CGCAGTTGCC GAACGGCGCG TCGCTGGATC GCACGGAGAA AGTGATTCGC
GACATGAGCT CGATCGCGCT GAAGCAGCCG GGCGTGGAGA GCGCGGTGGC GTTCCCGGGG
TTGTCGGTGA ACGGCTTCAC GAATAGCTCC AGCGCGGGCA TCGTGTTCGT CACGCTCAAG
CCTTTCAAGG ATCGTGGCGA CAAGAAACTC TCGGCCGGTG CGATTGCCGG TGCGCTGAAT
CAGCAATACG GTGCGATCAA GGATTCGTTC GTCGCGGTGT TCCCGCCGCC ACCCGTGCTC
GGTCTCGGCA CGCTCGGCGG CTTCAAGATG CAACTGGAGG ATCACGGCGC GCTCGGTTAC
GCGGAGTTGA ACAAGGCAGC GGAAGCGTTC GTGAAGAAGG CGGCACAGAC GCCTGAACTC
GGCCCGACCT TCTCCAGCTA TCAGATCAAC GTGCCGCAAC TGAACGTGGA TCTCGATCGC
GTGAAGGCCA AGCAGCTCGG TGTGCCGGTC ACGGACGTGT TCAATACGAT GCAGATCTAT
CTGGGCTCGC TGTATGTGAA CGACTTCAAC CGTTTTGGCC GCGTGTATCA GGTGCGGGTG
CAGGCGGACG CGCCGTTCCG TCAGCGCGCC GACGACATCC TGCAACTGAA GACGCGCAAT
GCCGCGGGCG ACATGGTGCC GCTGTCGTCG CTGGTGACGG TAACGCCGAC GTTCGGCCCG
GAAATGGTGG TGCGTTACAA CGGCTATACG GCTGCCGACA TCAACGGTGG ACCGGCGCCG
GGCTTCTCGT CGGGTCAGGC GCAGGCCGCG GCCGAACGCG TGGCGGCGGA AGTCCTGCCG
CACGGTGTGA AGCTCGAATG GACCGACCTG ACGTATCAGC AGATTCTGGC CGGCAATGCA
GGCTTGTGGG TGTTCCCGAT CAGCGTGCTG CTCGTGTTCC TCGTGCTCGC CGCACTGTAT
GAAAGCCTGA CGCTGCCGCT TGCGGTGATC CTGATCGTGC CGATGAGCGT GCTGTCCGCG
CTGACCGGCG TGTGGCTCAC CGGTGGCGAC AACAACATCT TCACGCAGAT CGGTTTGATG
GTGCTGGTGG GGTTGTCGGC GAAGAACGCG ATCCTGATCG TCGAATTCGC GCGCGAACTG
GAGCACGACG GACATACGCC GCTCTCGGCG GCGATCGAAG CTAGCCGCTT GCGTCTGCGG
CCGATCCTGA TGACGTCGAT CGCTTTCATC ATGGGCGTGG TGCCGCTGGT GCTGTCGAGC
GGAGCCGGTT CGGAGATGCG TCATGCGATG GGTATCGCGG TGTTCTTCGG CATGCTCGGC
GTCACGCTGT TCGGTCTGAT GCTGACCCCT GTGTTCTATG TGGTGCTGCG TACGCTGGCG
GGTGGAACCA TTCACGTCGC GCAGAAGGAT TCGCCGCACT ACGGCGCGCC GGTGACGGAC
GCCTGA
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| Protein sequence | MNISKFFIDR PIFAGVLSVL ILLAGVISLF KLPISEYPEV VPPSVVVHAQ YPGANPKVIA
EAVASPLEEQ INGVENMLYM QSQANSDGNL TLTVTFKLGT NPDLATQLVQ NRVNQALPRL
PEDVQRLGIT TIKSSPTLTM VVHLISPNNR YDMTYLRNYA LLNVKDRLAR IQGVGEVQLW
GSGDYAMRVW LDPQKVAQRG LTATEVVNAI REQNIQVAAG VIGASPSVPG TQLQLSVNAR
GRLRTEGEFG DIIVKTAPDG GVTYLRDIAR IELAASEYGL RSLLDNKPAV ALAINQAPGA
NSLAISDQVR SAMKELAEDM PAGVEYKIVY DPTQFVRSSI EAVVHTLLEA IALVVIVVIV
FLQTWRASII PLIAVPVSIV GTFSLLLAFG FSINALSLFG MVLAIGIVVD DAIVVVENVE
RNIENGLSAR DATYKAMQEV SGPIIAIALT LVAVFVPLAF MTGLTGQFYK QFAMTIAIST
VISAFNSLTL SPALSAMLLR SHGAKEDFVT RVMNRLLGGF FRRFNKVFHR GSAEYGRGVT
GVLRRKGAML AVYAILLGAT VLISRVVPGG FVPAQDKEYL IAFAQLPNGA SLDRTEKVIR
DMSSIALKQP GVESAVAFPG LSVNGFTNSS SAGIVFVTLK PFKDRGDKKL SAGAIAGALN
QQYGAIKDSF VAVFPPPPVL GLGTLGGFKM QLEDHGALGY AELNKAAEAF VKKAAQTPEL
GPTFSSYQIN VPQLNVDLDR VKAKQLGVPV TDVFNTMQIY LGSLYVNDFN RFGRVYQVRV
QADAPFRQRA DDILQLKTRN AAGDMVPLSS LVTVTPTFGP EMVVRYNGYT AADINGGPAP
GFSSGQAQAA AERVAAEVLP HGVKLEWTDL TYQQILAGNA GLWVFPISVL LVFLVLAALY
ESLTLPLAVI LIVPMSVLSA LTGVWLTGGD NNIFTQIGLM VLVGLSAKNA ILIVEFAREL
EHDGHTPLSA AIEASRLRLR PILMTSIAFI MGVVPLVLSS GAGSEMRHAM GIAVFFGMLG
VTLFGLMLTP VFYVVLRTLA GGTIHVAQKD SPHYGAPVTD A
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