Gene Bxe_B0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0816 
Symbol 
ID4008695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2460658 
End bp2462526 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content65% 
IMG OID637951868 
Productputative transmembrane protein 
Protein accessionYP_554488 
Protein GI91779280 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.420472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTCA TCGTTCTCGC CTATCTCGGC GGTGCTCTTA CCATTCTCAG CCCGTGCATC 
CTGCCGGTGC TGCCGTTTGT TTTCGCACGC GCCGATCAGC CTTTCGTGCG CAGCGGCTTG
CCCTTGCTCG CGGGCATGGC GCTGACGTTC GCCATTGTCG CGACGCTTGC CGCCGTGGGC
GGCGGCTGGG TGACGCAAGC CAACCAGTAT GGCCGCTGGC TGGCTATCGC GCTGCTCGCG
ATTTTCGGGC TGACGTTGCT GTTCCCACGC TTCGCCGATC ATCTGATGCG GCCGCTCGTC
CGCGCCGGCA ATCGCTTGTC CGATTTCGCG CAGGCCGACG GCCAGCAGAT CCGCGCGGGT
TCGTCGTTTC TGCTTGGCAT TGCCACCGGG CTGCTGTGGG CGCCGTGCGC CGGTCCGATT
CTCGGTCTCG TGCTGACCGG CGCGGCACTG CGCGGTGCGA GCGTCGGCAC CACGCTGCTG
CTGGCGGCTT ATGCGGCCGG CGCCGCGACG TCGCTGGCGG TGGCGCTGCT GATCGGCGGC
AAGGTGTTCA CGGCAATGAA GCGTTCATTG GGTGCGGGCG AATGGATTCG CCGCGGAATC
GGCGTGGCGA TGCTGGGCGG CGTGGCTGCG ATCGCACTCG GTTTCGACAC CGGCGTGCTC
GCCCGTGTCA CGACGGTCGC GACCGGCGGA CTTGAGCAGA GACTCGTCGA CAAGCTTTCG
CCGAACACGG CGGCGAGCAC ATCGCCGGTT GCCGGAAATC CGTCGGACAT ATCCGGCAGC
GGCGCGATGA AAAGCGCCGG CCCGGCGACG GGGTCCGCCA CTAACACCGA ACCGGCCGCT
GCCGCGATGT CCGGCGGCGC GATGATGCGC GCCGTCGCTA ATGTGGCGCC GCTGCCGGTC
GAAGGTGTGC TGCCCCCGCT GGATGGCGCG GTCCAATGGC TCAATTCGCC GCCGCTCACG
TTGCAGGATT TGCGCGGCAA AGTCGTGCTG ATCGATTTCT GGACTTACTC GTGCATCAAC
TGTCTGCGTT CGCTGCCGTA TGTCAAAGCG TGGGCGCAGA AATACAAGGA TCAGGGGCTC
GTCGTGATTG GCGTGCACGC GCCGGAATTC GCCTTCGAGC GTAATATCGA CAACGTGAAG
AAGGCCGTGC ATGACCTGGG CGTCGACTAC CCCGTGGCGA TCGACAACAA CTACGCGATC
TGGCGCGCTC TGAATAACCA GTACTGGCCC GCACACTATT TCGTCGATGC CAGAGGGCAG
ATCCGCTATC ACCATTTCGG CGAAGGCGAC TATGCGGAGT CCGAAAAGGT GATCCAGCAA
TTGCTGACCG AAGCAGGCCA CGCGGATGCG TCGAAGGTTG CAATCGGGAT TGCGAACGCC
GGCGCGCAGG GCGTGCAGGC CGCCGCGGAC AACGCCGACA TGCAATCGCC GGAGACCTAT
GTCGGTTATC AGCGGGCGGA GAACTTCGCG TCGCCGGGCG GGGAAGTCGA GGACAGGACG
CACACCTATG CGGCTCCGTC GCAGCCCGGC GTCGACGAAT GGGGGCTCGC CGGATCATGG
AATGTGGGCG CGGAGCACGC CACGCTCGCT GCCGCGTCGG GACGGATTGT GTATCGCTTT
CATGCGCGCG ATCTGCATCT GGTGCTCGGT CCAGGTAAGG ACGGCAAGCC GGTGCGGTTT
CGCGTGAGCG TCGACGGTGC CGCGCCGGGC GCTTCGCACG GCACGGACAT CGCGCCCGAT
GGCAGCGGCA CCGTAACCGG GCAGCGTCTG TATCAACTGG TGCGGCAAAG CGGCGAGGTC
GCGGACCGCA CCTTCTCGAT CGAATTTCTC GACCCGGGTG TGCAGGCATT TGCCTTCACG
TTCGGATAA
 
Protein sequence
MLLIVLAYLG GALTILSPCI LPVLPFVFAR ADQPFVRSGL PLLAGMALTF AIVATLAAVG 
GGWVTQANQY GRWLAIALLA IFGLTLLFPR FADHLMRPLV RAGNRLSDFA QADGQQIRAG
SSFLLGIATG LLWAPCAGPI LGLVLTGAAL RGASVGTTLL LAAYAAGAAT SLAVALLIGG
KVFTAMKRSL GAGEWIRRGI GVAMLGGVAA IALGFDTGVL ARVTTVATGG LEQRLVDKLS
PNTAASTSPV AGNPSDISGS GAMKSAGPAT GSATNTEPAA AAMSGGAMMR AVANVAPLPV
EGVLPPLDGA VQWLNSPPLT LQDLRGKVVL IDFWTYSCIN CLRSLPYVKA WAQKYKDQGL
VVIGVHAPEF AFERNIDNVK KAVHDLGVDY PVAIDNNYAI WRALNNQYWP AHYFVDARGQ
IRYHHFGEGD YAESEKVIQQ LLTEAGHADA SKVAIGIANA GAQGVQAAAD NADMQSPETY
VGYQRAENFA SPGGEVEDRT HTYAAPSQPG VDEWGLAGSW NVGAEHATLA AASGRIVYRF
HARDLHLVLG PGKDGKPVRF RVSVDGAAPG ASHGTDIAPD GSGTVTGQRL YQLVRQSGEV
ADRTFSIEFL DPGVQAFAFT FG