| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0726 |
|---|
| Symbol | |
|---|
| ID | 4008785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2558610 |
|---|
| End bp | 2561273 |
|---|
| Gene Length | 2664 bp |
|---|
| Protein Length | 887 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951958 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_554578 |
|---|
| Protein GI | 91779370 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.715239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTTTC AATCGACTTT TCCCTTCGAA ACGTCCGCGG CGCGCGCGGA CGCTTCGTCC
CTGCTGCGCC TGCTGCCGGC CCACGAGGGA CATTGGGACG AGTTACGCGA CGCCTCGGGC
GCATTGCGCG AGCCGTGGCG GCAATTCTTC GAACGGCTCG GCGAAGTCGG CATCGCGCGG
CTCGACGATC ATCTCGCCTC GGTCGCGCAG CAGATCCGCG ACAACGACAT CAGCTACAAC
GTCTATGCGG ACAACGGCGA GCCGCGGCCG TGGGCGCTCG ACTTGCTGCC GTTCCTGATC
AGCGAGGACG AGTGGGCGCA TATCGAGCGC GGCGTCACGC AGCGCGCGCA TCTGCTCAAC
GCGATCGTCG CCGATATTTA TGGGCCGCAA ACCTTGCTGG AGCGCGGGCA ACTGCCGCCC
GCGCTGGTGT TCGGCCATCC CGGCTATCTG CGCTCGGTGA GGGGCTTCAC GCCGCCGGGC
GGCCAGTATC TGCAAGTGGT CGCGGTGGAT CTGGCGCGCA CGCCGAACGG CGACTGGACC
GTCATGGCGC ATCGCACCGA GGCGCCGTCC GGGCTCGGTT ACGCGCTGGA AAACCGCCTG
ATCGTGTCGA CGCTGTTCGC CGATCCGTTC CGCGCCCTGC GCGTGAGCCG GCTCGCGCCG
ACCTACTCGC AACTGATCGC GACCCTCGTG CAGGCGGCGC AGGCCACGAT GCGGGACGAC
AGCGACGATG TCGACCGTTC GCCGCATATC GCCTTTCTCA CGCCGGGGCC GTTTAGCGAA
ACCTATTTCG AGCACGTATT TCTGGCGCGC TATCTCGGCG TGACGCTGGT CGAGGGCAAG
GACCTGACCG TGCGCGACGA CAAACTCTAT CTGAAGACGC TCGCCGGTCT CGAACGCGTG
CACGTGGTGC TGCGGCGTCT GGACGACGCG TTCTGCGATC CGGTCGAACT GCGCGCCGAT
TCGAGCATCG GCGTGCCCGG CTTGCTACAG GTGATGCGCG CGGGCAATGT GATCGTCTCG
AATGTGCCGG GCTCCGGCTT TGTCGAATCG CCGGCCTTGC ATGGCTTCCT GCCGGGCATC
GCCGAAGTGC TGCTCGACGA GGACCTCGTA TTGCCTAGCG TGCCGACATG GTGGTGCGGC
GAAAAGGCGG CGCGCAACCA TGTCTTCGCG CGTCTCGACG AAGCGCTCAT CGTGCCCACG
TGGCCGGTCG CCGCGCGCGA TGCGCCGCCC GGCATCGAGC ACGGCCGGCA GCGGCTGTCG
ACGTGGCGCG AGCGTATCGA AGCCATGCCC GACACCTACA CGATCCAGCA GGCGCAGCGC
TTTTCCTGCA CGCCGCGTTA CGAAGACGGC ACCATTGGCC GCCGTCCGTC GGTGCTGCGC
GTCTACGCGA TCGCGGACGT CAACGGCGGC TGGCATGTAA TGCCCGGCGG CTTCACCCGC
ATGGCCGCCG AACGCCAGAC CACGGTCTCC ATGCAGTACG GCGGCAGCAG CGTCGATACG
TGGGTGCTGT CGAGCCAGCC GACTTCGACC TTCACGCTGC TGCCTTCGCC CATGCAGCCT
GCCGACCTCG CGCGCAAACA CCGCACGGTG TCGAGCCGCG CGGCGGAAAA CCTGTTCTGG
GCCGGGCGTT ACGGCGAGCG GGCCGAAAAC AACGTGCGGC TGCTGCGTCT GATTCTAGGC
TCGCTGGAAG GCAACGACGC CGACGCGATG TTTCCGACCC TCGTCGAACT CGCCATGCAT
TGCGGGCTCG TGCAGTCCGG CGACATGTTC TCGCCGCATT CGCCGCAAGC CTTCGAGCGT
GCGCTGGTCG CCAATCTGAG CGAGAGCACG GGCGCCGCGA GCATCGGCCA GAACCTGAAC
TGTCAGGCGC GCTCGAACGG GGAGGTGCGC GGGCGTCTGT CGAACGATCA CTGGCGCACG
ATTCTCGCGG CGCGCAACGA CTTCCGCGAC GCGTTGCAGA CGCTGATGCC GGCGCCGGGG
TACAGCGGCG GGGCATCGCA GGGCAATGGC GGCGGTAATG GCAATGGCAA CGGCGGCAAC
GGCAACGGCC GCGGCGAGCG CTACGAGCGT TACGATCGCG TCACGTTGAT GAACGCGCTC
GAACGCCTGT CGGTGCAGTT GTCGGCAATC AGCGGCGCGC AGGGCGACCG CATGACCCGC
GACGAAGCAT GGCGCCTGCT GTTCGTGGGC CGTCACATCG AGCGCGTCTC GGCGATGAGC
TCGTTCCTGC GCGTAGTCGC CGATAAAGGC CAACTCTCCA CGCCCGCCGG TTTCGATCTG
CTGCTGCAAT TGTTCGACAG CACGCTCACG TACCGCTCGC TCTATCCGGG CCGCTTCGAA
GTGCCGGCGT TGCTCGATCT GCTGGTCATC GAGCCGACCA ATCCGCGCGG TATTTACGGC
GTGTACGAGC GTCTGCGCAA AAAGCTCGAC GAGATCGCCG TGGCGGCGGG CGGCTCGCGG
CATCGTCCGT TCGCCGAATT GATGGTGCCG GCCGCTTCGT TGCCGTCGCT CGAATCGCTG
TGCGCCGTCG ACGAAGACGG CGCCTACGGC AATCTGATTG CGGTGTGCGA TCAGATCGGC
GGTTTTGCCG GTGCGGCCGC GCATGAAATC AGCGCGCGCT ATTTCAGTCA CGCCAGCACG
GTCGCCTCGC AGGTGTGGTC ATGA
|
|---|
| Protein sequence | MAFQSTFPFE TSAARADASS LLRLLPAHEG HWDELRDASG ALREPWRQFF ERLGEVGIAR
LDDHLASVAQ QIRDNDISYN VYADNGEPRP WALDLLPFLI SEDEWAHIER GVTQRAHLLN
AIVADIYGPQ TLLERGQLPP ALVFGHPGYL RSVRGFTPPG GQYLQVVAVD LARTPNGDWT
VMAHRTEAPS GLGYALENRL IVSTLFADPF RALRVSRLAP TYSQLIATLV QAAQATMRDD
SDDVDRSPHI AFLTPGPFSE TYFEHVFLAR YLGVTLVEGK DLTVRDDKLY LKTLAGLERV
HVVLRRLDDA FCDPVELRAD SSIGVPGLLQ VMRAGNVIVS NVPGSGFVES PALHGFLPGI
AEVLLDEDLV LPSVPTWWCG EKAARNHVFA RLDEALIVPT WPVAARDAPP GIEHGRQRLS
TWRERIEAMP DTYTIQQAQR FSCTPRYEDG TIGRRPSVLR VYAIADVNGG WHVMPGGFTR
MAAERQTTVS MQYGGSSVDT WVLSSQPTST FTLLPSPMQP ADLARKHRTV SSRAAENLFW
AGRYGERAEN NVRLLRLILG SLEGNDADAM FPTLVELAMH CGLVQSGDMF SPHSPQAFER
ALVANLSEST GAASIGQNLN CQARSNGEVR GRLSNDHWRT ILAARNDFRD ALQTLMPAPG
YSGGASQGNG GGNGNGNGGN GNGRGERYER YDRVTLMNAL ERLSVQLSAI SGAQGDRMTR
DEAWRLLFVG RHIERVSAMS SFLRVVADKG QLSTPAGFDL LLQLFDSTLT YRSLYPGRFE
VPALLDLLVI EPTNPRGIYG VYERLRKKLD EIAVAAGGSR HRPFAELMVP AASLPSLESL
CAVDEDGAYG NLIAVCDQIG GFAGAAAHEI SARYFSHAST VASQVWS
|
|---|
| |