| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0704 |
|---|
| Symbol | |
|---|
| ID | 4008807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2586972 |
|---|
| End bp | 2587889 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637951979 |
|---|
| Product | putative 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_554599 |
|---|
| Protein GI | 91779391 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.205033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.229354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATC CGACAGCACA GCCCGCCCCA TCCACCGTTC GCCGTGTCGC GTTTCTCGGT
CTCGGCGTGA TGGGCTATCC GATGGCCGGC CATCTCGCGA AAGCAGGCCT CGACGTGACC
GTGTACAACA GGACCGCCTC GAAAGCGCAG CAATGGGTGG CCGAGTACGG CGGCCGCGCC
GCCGCCACGC CCCGCGAAGC CGCGGACGGC GCCGATCTGG TCCTCGCCTG CGTCGGCAAC
GACGACGATC TGCGCAGCGT CACGCTCGGT GAGAACGGCG CGTTCGCCGG CATGGCGCGG
AATACCGCGT TTGTCGATCA CACCACGGCC TCGGCGAACG TGGCGCGCGA ACTGGCGGAA
GTCGCGGGCC AGAAAGATTT GCATTTCATC GACGCGCCCG TGTCGGGCGG CCAGTCCGGC
GCGCAGAACG GCAAGCTGAC AATCATGTGC GGCGGCGAGC CGGCCGTCTT CGAACAGGCG
TCGCCGGTGC TCGCGCACTA TGCGGCGGCC GTCACGCTGG TCGGCGCCGT CGGTGCCGGG
CAACTGGCGA AAATGGTCAA CCAGATCTGT ATCGCCGGCG TCGTGCAGGG GCTCTCCGAG
GCGATCAACT TCGGCCAGCT CGCCGGCCTC GACATGCCGC TCGTGCTGGA GGTGATCGGC
AAGGGTGCGG CAGCGAGCTG GCAAATGGAC AATCGCGGCA AGACCATGAT CGACGGCAAG
TTCGATTACG GCTTTGCCGT CGACTGGATG CGCAAGGACC TCGGCTTCTG TCTGGATGAA
GCAAAGCGCA ATGGCGCGTC GCTGCCCGTG ACCGCCCTCG TCGACCAGTT CTATGCGGAC
GTGCAGGCGC TCGGCGGCAA CCGCTTCGAC ACCTCGAGCC TGATCTGGCG TTTGCGCGCG
CTCAAGCCGG CCAGGTGA
|
|---|
| Protein sequence | MNHPTAQPAP STVRRVAFLG LGVMGYPMAG HLAKAGLDVT VYNRTASKAQ QWVAEYGGRA
AATPREAADG ADLVLACVGN DDDLRSVTLG ENGAFAGMAR NTAFVDHTTA SANVARELAE
VAGQKDLHFI DAPVSGGQSG AQNGKLTIMC GGEPAVFEQA SPVLAHYAAA VTLVGAVGAG
QLAKMVNQIC IAGVVQGLSE AINFGQLAGL DMPLVLEVIG KGAAASWQMD NRGKTMIDGK
FDYGFAVDWM RKDLGFCLDE AKRNGASLPV TALVDQFYAD VQALGGNRFD TSSLIWRLRA
LKPAR
|
|---|
| |