| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0676 |
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| Symbol | |
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| ID | 4008835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2621552 |
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| End bp | 2622922 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637952007 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_554627 |
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| Protein GI | 91779419 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGATT CGGCGCCTGC GCTGCCCGGC GCCCCCGAGA TTGCCGCGCT CGTGTCCTAT
CTGGAATACG ACCCGCAGCC CTCGATCGTG CTCGATCCGG ACTACCGCAT TCTTGCGGCC
AATACCGCGT ACCAGCGGCA GTTCGGCGTG GCAGGGCAGC CGCACGTGGG GCGCCGCTGC
TACCAGGTAT CGCACCACTA CGAGGTGCCG TGCGATCAGG CCGGCGAGCA TTGCCCGATG
AAGCGCGCGT CCGATACGCG CAGCGCGGAT CGCGTGCTGC ACATCCATCA CACGCCGCGC
GGCCCCGAGC ACGTGGACGT TGAACTGCGG CCGATCTTCG ACACCCGGTC TGAGATCGTC
GCGTATGTCG AGCGGCTCTC CACGGTGCGC GGCGCCTCCG CGCGGCCGAG CGTGGATGGC
CTCGTCGGCC GCGCACCCGC ATTCAACGAG GCGATCTCGG CATTGCAGCG TGTCGCGCCG
TCGATGTTGC CCGTGCTGCT GCTCGGCGAG TCCGGCACCG GCAAGGAGCT GTTCGCCCAT
GCGCTGCACG AGGCAAGCGA TCGGGCACAA CGGCCGTTCG TCGTGGTCGA TTGCTCCGGC
ATCACGGAGA CGCTGTTCGA GAGCGAACTG TTCGGCTACG AGAAGGGCTC GTTTACCGGC
GCCTCGACCC GCAAGCCGGG ACTCGTCGAA ACGGCCCAAG GCGGGACGCT GTTTCTCGAC
GAAATAGGCG ACGTGCCGTT GTCGATGCAG GTCAAGCTGC TGCGTCTCAT CGAGACGGGC
GCGTTCCGCC GCGTGGGCAG CGTCGAGACG CAGCGCGCGG ACTTCCGGCT CGTCGCGGCG
ACTCACAAGC CGCTCGAGCA GATGCTGGCG ACCGGACAGT TCCGCTCGGA CCTGTATTTC
CGCATCAGCG CGTTCCCGAT CCGCCTGCCG GCGCTGCGCG ACCGTGCCGA CGACATTCCG
CTGCTGGTGG ACTCGACTTT GCAGCGCATC GCCTCCGGGC GCAGCGCAGC ACCGCGCAAG
ACCTCGGTCG CAGCGGATGC GCTCGCCCGG CTGTGCGCCT TTCGCTGGCC GGGCAACATC
CGCGAGCTAC GCAACGTGCT CGAACGCGCG AGCCTGCTGG CGGACGACGG TGTGATCCGC
CCGGAACATT TGCCGGACAC GGTCAGGGCC GACGTATCGC CGGCGAGTCC TGCGGCTGCG
CCGCTGCGCC ATTCCGCTCG CATCAAGCTC ACGGACGCCG AACTGGCTCG CATGGCCGCG
GATTTCGTGG GGAGGCGCAA GGAGCTCGCC GCACAACTCG GCATGAGCGA GCGCACGCTG
TACCGGCGGC TAAAGGCTCT TGGCGAAGAG GACCCGCACG GCGAACGCTA A
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| Protein sequence | MPDSAPALPG APEIAALVSY LEYDPQPSIV LDPDYRILAA NTAYQRQFGV AGQPHVGRRC
YQVSHHYEVP CDQAGEHCPM KRASDTRSAD RVLHIHHTPR GPEHVDVELR PIFDTRSEIV
AYVERLSTVR GASARPSVDG LVGRAPAFNE AISALQRVAP SMLPVLLLGE SGTGKELFAH
ALHEASDRAQ RPFVVVDCSG ITETLFESEL FGYEKGSFTG ASTRKPGLVE TAQGGTLFLD
EIGDVPLSMQ VKLLRLIETG AFRRVGSVET QRADFRLVAA THKPLEQMLA TGQFRSDLYF
RISAFPIRLP ALRDRADDIP LLVDSTLQRI ASGRSAAPRK TSVAADALAR LCAFRWPGNI
RELRNVLERA SLLADDGVIR PEHLPDTVRA DVSPASPAAA PLRHSARIKL TDAELARMAA
DFVGRRKELA AQLGMSERTL YRRLKALGEE DPHGER
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