| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0651 |
|---|
| Symbol | |
|---|
| ID | 4008860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2652141 |
|---|
| End bp | 2653559 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637952032 |
|---|
| Product | ABC polysaccharide efflux pump, ATPase subunit |
|---|
| Protein accession | YP_554652 |
|---|
| Protein GI | 91779444 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.601465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.274396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTCTG ACCATATCAG GCTACCAGCA CAACTGGCCG CCGGCGACGT TGCGATACGC
GTCGAAAACC TGTCCAAGCG CTTTGCTGTC TACCACACCA GGCTGGAACG CTTGAAGCAC
ATCGTCGCAC CGCGTCGAAC AAAAGGTTTC GCCGAATTCT GGGCACTCGA CCATGTCGAT
CTGACTATCG GTCGCGGTGA AGCCTGCGCA ATCATCGGTC GCAATGGATC AGGCAAGTCC
ACGTTGCTGC AGATTCTCTG CGGGACTTTG CGCGCTACGT CTGGCCGGGT TGCGGTCAAC
GGGCGCGTTG CCGCACTTCT GGAACTGGGC GCGGGCTTCA ACGCCGACTT TACCGGCCGG
GAGAATGTCT ACCTCAACGG CGCGGTACTG GGGCTGTCGC ATACGGAGAT CAACGAGCGC
TTTGTGGAGA TTGAAGCCTT TGCGGAAGTG GGCGATTTCA TAGACCAACC GGTCAAGACT
TACTCGAGTG GTATGTATGT GCGTCTGGCG TTCGCTATTG CGATTCACGT CGATCCGCAG
ATCCTGATCG TTGACGAAGC GCTCGCCGTT GGGGACGCAC GCTTTCAGGC GAAGTGTCTT
AACCGGATCA AGAAGATGCA GGCCGATGGC GTCACGCTGT TGTTCGTGTC GCACGACGTC
AGTGCGGTTC GCACACTATG CGACCGGGCG CTGTGGCTCG ATTGTGGAAA GGTCAAAATG
CTCGCCGACG CATTTTCAGT TACTGCGCAA TACAGCCAGT TCCTGTTCGA GGGCGAAGAC
TACGCGGTTG CCGGGAACGG CTCGGGCAGT CCGCAGGACT CATCCGGCGC GCTGCAAAGC
GCTGCTTCTC AGGATATCTC GCCATCGGCG CACCCGGAAG AAGCGAATCA GTCTCGCGCT
GGCGCTTGCG GCGAGGAACT GATGGCCATG CATCGTCCGA TCAACCATTG GGGCAGCCAT
GTCGGCTCAA TCGTTCAGGC GGGAATTTAC AACGCCCGTG GAGAGCGGGC GTCGACCTTT
GTCGCCGGCG AGCCTATCGA GGTCAGGGTG ATCTTCCGGC CGCCGTTGAA CGCCGATCGG
AAAACGATGA GCGTTGCATT TTCGCTGAAG GACTTGCGCG GCACGGACCT GATCGTCTCG
ACGACATGGG ACCAGCGGCG GCTCGACTTT GAACAGGCCG GTGGCGAGGC GTGCATCCGG
TTCCGGCTCA GGAATCAACT GAACAGAGGC AGTTATCTGC TTGCCGTTGC GCTGGAAGAC
CGGGCCGGCG TCGCGCCCCA ATACTATGAG TACATCGAGG GCGCGCATTA TTTCACGTCT
CTCGTCGAAG ACACCCTGTT CGGATCTTTT GTCGTCGACG TCGAGCAAAC GATCGAGCCG
GGACATAGCC TATATGCGAA TGCACGGGTA AGCGTATGA
|
|---|
| Protein sequence | MCSDHIRLPA QLAAGDVAIR VENLSKRFAV YHTRLERLKH IVAPRRTKGF AEFWALDHVD
LTIGRGEACA IIGRNGSGKS TLLQILCGTL RATSGRVAVN GRVAALLELG AGFNADFTGR
ENVYLNGAVL GLSHTEINER FVEIEAFAEV GDFIDQPVKT YSSGMYVRLA FAIAIHVDPQ
ILIVDEALAV GDARFQAKCL NRIKKMQADG VTLLFVSHDV SAVRTLCDRA LWLDCGKVKM
LADAFSVTAQ YSQFLFEGED YAVAGNGSGS PQDSSGALQS AASQDISPSA HPEEANQSRA
GACGEELMAM HRPINHWGSH VGSIVQAGIY NARGERASTF VAGEPIEVRV IFRPPLNADR
KTMSVAFSLK DLRGTDLIVS TTWDQRRLDF EQAGGEACIR FRLRNQLNRG SYLLAVALED
RAGVAPQYYE YIEGAHYFTS LVEDTLFGSF VVDVEQTIEP GHSLYANARV SV
|
|---|
| |