| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0638 |
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| Symbol | |
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| ID | 4008873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2665600 |
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| End bp | 2667174 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637952045 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_554665 |
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| Protein GI | 91779457 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0484455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTACATC AAAGGCTTTC GCTGCGCCGG CGCTTGCACA AGAAATTACG CGCCTATGGC
GCCGGCGTGT CGCGATACGT GGGCAACCAG CCGTTTTTTG TCGGCGTGGC CGGCACGCTG
GTCGCCGTGT CGATGGCGGG CTTGACGCTG CTCACGCTCA GCAGTGGCCG GGCCGATGCG
CTCGATCACG CGCGCGAGAC CTCGCGAAAC CTCGTCGCGA TCATTTCCAC GGAGCTCGAA
CGCAACGTGG AAATCTGCGA CCTGTCATTG CAGGCAATGG CCGACGGGGC GCGCAACCCG
GCTTCGTGGA AGTTGCCCGC GGACGTGCGG CGCGCGGTGC TGTTCGACGG CGCGACAACC
GCGGCTTACC TGGGCGGCGC CTATGTGATC GATCGCGAGG GCCGGGTCGT CGCCTCGCAG
AAGAGCGACG TCAATACCGC GGTCAGCCTC GCGGACCGCG ACTATTTTCT GGTCCATCAA
CGCAGCCCCG CCGTGGGCCT GTATTTCTCT CATCCGTTCC ATTCGCGGCT GCGCGACGGC
AAACTCTCCA TCGGTCTCAC GCGGCGCATC GACGAAATCG ACGGTAGCTT CGACGGTGTC
GCGTTGCTGG CTATTCGCAT CGAATATTTT CAGCATCTGC TGGATCGGAT CAGCACGGGC
CGATTGGGGT CGGTGTTCAT CGTGATGGAC GACGGCACCC TGCTGGCGCG CAAACCGTTA
TCCCCGCGCG ATATCGGTTC GAGCATCGCG AAATCGCCCA CCTTCCAGAT CATGGCCGCG
CATAACGCGG GCACGTATGT GGCGAATTCG GCCGTGGACG GTGTGCGGCG CATGTTCACC
TACGCACGCG TGCCGGGCAC GCCGCTGATC GCCGTGGTCG CGCCTTCCGT GGACGAAGTG
CTGGCGCCGT GGTGGCACCG CAACTGGATT ACCGCTGTGC TGACGCTCAC GTTCGGCGCG
GTATTCGTGA TGGTCTCCTG GCTGTTGTCG TTGGCGTTGC GTGACAAACT GCGCGCGCAG
GCCGCGCTGG TGCGTCTTGC GGCGACCGAC CCGCTCACCG GCCTCGGCAA CCGCCGCGTG
CTCGATACCC GGCTCGACGA AGAATGGCGG CGAGCGCGGC GCAGCGGGCA ACCGCTGTCT
GCGCTGTTCA TCGACATCGA TCACTTCAAG CAGTTCAACG ACGCTTATGG CCATGCGAGC
GGCGACGAAG CCCTGGTCGC GGTGGCCGAA TGCATCTCGG CGGCGGTGCG CCGTTGGGTC
GACGTGGTGG CGCGGTACGG CGGCGAGGAG TTCGCCGTGA TCTTGCCGGA CACCTCGGCC
GAGGGCGCGC TCAAGGTGGC GGAGAAGATT CGCCGCAAGG TGCAGGGGCA GGATGTCATC
CACGGCGATG GCGAGTCGGC TACGGTCACG GTGAGCGTGG GTTGCGCGAC CTGTGTGCCG
GCCGAGGGCG CCAATGCGCT CGATCTGCTG GCCGCGGCAG ACCGGCAGCT TTACGTCGCG
AAGGCGGCCG GACGCAATCG CGTCAGTTCG GACATGCTGA CGGAGCGTCC CATGCCGCAG
GACTCGCCGT CTTAG
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| Protein sequence | MVHQRLSLRR RLHKKLRAYG AGVSRYVGNQ PFFVGVAGTL VAVSMAGLTL LTLSSGRADA
LDHARETSRN LVAIISTELE RNVEICDLSL QAMADGARNP ASWKLPADVR RAVLFDGATT
AAYLGGAYVI DREGRVVASQ KSDVNTAVSL ADRDYFLVHQ RSPAVGLYFS HPFHSRLRDG
KLSIGLTRRI DEIDGSFDGV ALLAIRIEYF QHLLDRISTG RLGSVFIVMD DGTLLARKPL
SPRDIGSSIA KSPTFQIMAA HNAGTYVANS AVDGVRRMFT YARVPGTPLI AVVAPSVDEV
LAPWWHRNWI TAVLTLTFGA VFVMVSWLLS LALRDKLRAQ AALVRLAATD PLTGLGNRRV
LDTRLDEEWR RARRSGQPLS ALFIDIDHFK QFNDAYGHAS GDEALVAVAE CISAAVRRWV
DVVARYGGEE FAVILPDTSA EGALKVAEKI RRKVQGQDVI HGDGESATVT VSVGCATCVP
AEGANALDLL AAADRQLYVA KAAGRNRVSS DMLTERPMPQ DSPS
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