| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0599 |
|---|
| Symbol | |
|---|
| ID | 4008912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2705585 |
|---|
| End bp | 2707288 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637952081 |
|---|
| Product | polar amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_554701 |
|---|
| Protein GI | 91779493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.741519 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.106218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAT TGCGTATCAA ACACAACGTC GTCGGCGCGC TCGGCATGGT CGCCATGTTC
GTCTTTCAGC CGGCAATGGC CGCCGGTCTG GATGGCGTTC AGGTGCTCGA CGGTTTCAGG
GAACTCGTGG GCTATGTCGG CTCGCCGTTC CTGCTCGGCG GCGCGTGGAT CGCGGTGAAG
ATCACGCTGA TCGCAATGTC GATCGGGCTG GTGCTCGGGC TCGGGCTTGC GCTGATGCGG
CTATCGCGAT TCAGGACCTT GAACTCGGCG GCGTGGGGTT ATATCTGGTT CGTGCGCGGC
ACACCGCAAC TGCTGCAACT CGTGTTCATC TTCGACGCGC TGCCGCTGAT CGGTTTGCGC
TTCGATGAAG TCACGACCGC GGTTATCGGC TTTGCATTGA ACGAGGCGGC GTTCAGCGCC
GAACTGTTTC GTGCCGGAAT CCTCTCGGTG AACCGCTCGC AATCCATCGC GGCCGCCGCA
CTCGGCATGG GACCGTTGCT GACGTTACGC CGCATTATCC TGCCGCAATC CATGCGCGCG
GTGATCCCCG GTCTCGCCAA CGACACCATC GGCATGTTGA AGCTCACGTC GATCGCCTCG
GTGATCTTCG TCAACGAGCT CACGTTTCGC TCGCAACAGG TCGTCGGCCA GAACTTCAAG
TTCTTCACCG TGTTCGGCGC GGCGGCGGTG ATCTATCTGT TCCTGACGAG CGGAATCTCG
TTGCTTCAGG TATGGCTCGA ACGCATGTTC GATCACGAGC GCGACCGGAA ACTCACGTTC
TCGTGGTTCG GACTGCGCGC TTCGACGCCC GATGCAAAAC CGCTCGATGC ACGGGTCGTT
TTGCCGGCCA CTATCCAGGA ACCGGAGACG AACGATCACG CGTGGATCGG TACGCTGCTG
CCCGCAGAAA GCCGCACGCC GCGGCATCGC GATGAACCGT TCGTCGCGTG CAGGAACGTC
TGGAAATCGT ATGGCAAGCG CGAGATCCTG CGCGGCGTCG ACCTGTCGAT CGCGCACGGC
GAAGTGGTCG TGATCCTCGG TCCGAGCGGC TCCGGCAAAA GCACACTGCT CAAGCTCATC
AACCATCTCG AACCGCTCGA CTGGGGAACG ATCAAGGTCG ATTCACAGTA TGTGGGTTAT
CGGGAAGTAC CGGGCGGCGG CGGCACGGTG CGGCCTCTGC ACAACCTCGC GCGCGCACGC
GCCGAAGCGC GCGTGGGCAT GGTGTTCCAG CATTTCAACC TGTTCAGTCA TTTGAGTGCG
CTGGACAATA TCGTCGAAGC ACAGCGGCAG GTCTACGACG TGCCGCGCGC CGAAGCAGAA
GCGCTCGGCC GCGAGCTGTT GAAGAGCGTG GGCCTTGCCG CGCATGCGGA TTTTCTGCCG
CACCGGTTAT CGGGCGGACA GCAGCAGCGG GTGGCGATTG CGCGTGCGCT CGCAATCAAG
CCCAAGTTGA TGCTCTTCGA CGAACCGACC TCCGCGCTCG ATCCGGAACT TGTCGGCGAA
GTGCTTGGCG TGATGCGCGG GCTCGCCGAT GCCGGCATGA CGATGATCGT GGTCACGCAC
GAAATCCGCT TTGCCCGCGA TGTCGCCGAC CGCGTCGTTT TCATGGATGG CGGCGAGGTC
ATCGAGCAAG GGACACCGCA GCAGGTCATC GACAACCCGA CTCACGAGCG CACCCGAAAA
TTCCTTAACG TCGTCGCCAA TTAA
|
|---|
| Protein sequence | MKALRIKHNV VGALGMVAMF VFQPAMAAGL DGVQVLDGFR ELVGYVGSPF LLGGAWIAVK
ITLIAMSIGL VLGLGLALMR LSRFRTLNSA AWGYIWFVRG TPQLLQLVFI FDALPLIGLR
FDEVTTAVIG FALNEAAFSA ELFRAGILSV NRSQSIAAAA LGMGPLLTLR RIILPQSMRA
VIPGLANDTI GMLKLTSIAS VIFVNELTFR SQQVVGQNFK FFTVFGAAAV IYLFLTSGIS
LLQVWLERMF DHERDRKLTF SWFGLRASTP DAKPLDARVV LPATIQEPET NDHAWIGTLL
PAESRTPRHR DEPFVACRNV WKSYGKREIL RGVDLSIAHG EVVVILGPSG SGKSTLLKLI
NHLEPLDWGT IKVDSQYVGY REVPGGGGTV RPLHNLARAR AEARVGMVFQ HFNLFSHLSA
LDNIVEAQRQ VYDVPRAEAE ALGRELLKSV GLAAHADFLP HRLSGGQQQR VAIARALAIK
PKLMLFDEPT SALDPELVGE VLGVMRGLAD AGMTMIVVTH EIRFARDVAD RVVFMDGGEV
IEQGTPQQVI DNPTHERTRK FLNVVAN
|
|---|
| |