Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0539 |
Symbol | |
ID | 4008972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2766476 |
End bp | 2767825 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637952139 |
Product | glucarate dehydratase |
Protein accession | YP_554759 |
Protein GI | 91779551 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.492128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.504058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGA AACCTTCCCA ATCGAACGAC ACGCCGGTCG TCACCGAACT GCGCGTCGTG CCTGTCGCCG GCCGTGACAG CATGCTGCTC AATCTGAGCG GCGCGCATGG CCCGTTCTTC ACGCGCAACA TCGTCATCCT GCGCGACAGC GCTGGCCATA CCGGCGTGGG CGAAGTGCCG GGCGGCGAGA GCATTCGCAA GACCATCGAC GACGCGCGTG CGCTCGTCGT CGGTCAGTCG ATCGGCAATC TGCAGGCAGT CCTGAACAAG GTGCGCACAC AATTCGCCGA GCGCGACGCC GGCGGCCGCG GTTTGCAGAC GTTCGATCTG CGCACCACCA TTCACGCGGT GACCGCGCTC GAAGCCGCAT TGCTCGACCT GCTCGGCCAG CATCTGGGCG TGCCAGTCGC CGCACTGCTC GGCGAAGGCC AGCAACGCGA CGAAGTGGAA ATGCTCGGTT ATCTGTTCTA TATCGGCGAC CGCAACAAAA CCGACCTGGA CTATGCGAGC GGCGCCGATG CTCGCGACGA CTGGGAACGC GTGCGCACCG AGCAGGCGCT GACGCCCGGG GCCGTCGTAC GGCTCGCCGA GGCCGCGCAG GCGCGCTACG GCTTCAACGA CTTCAAGCTC AAGGGCGGCG TGCTGACTGG CGACGCCGAA ATCGAAGCGG TCACCGCGCT CGCCGAACGT TTTCCGAACG CGCGCGTGAC GCTCGACCCG AACGGCGCCT GGTCGCTGGC CGAAGCAGTG CGCCTATGCC GCGACAAGCA CGACGTGCTG GCCTATGCGG AAGATCCGTG CGGCGCCGAA AACGGCTATT CGGGCCGCGA GGTGATGGCC GAGTTCCGCC GCGCGACCGG CTTGCCGACG GCGACCAACA TGATCGCGAC CGACTGGCGC CAGATGGGCC ACGCGATCCA GTTGCAGTCC GTGGATATCC CGCTGGCCGA TCCGCACTTC TGGACCATGC AGGGCTCGGT GCGCGTCGCG CAGATGTGCA ATGACTGGGG CCTCACGTGG GGCTCGCACT CGAACAACCA CTTCGACATT TCGCTCGCCA TGTTCACGCA TGTCGCGGCC GCCGCGCCGG GCAGGATCAC CGCGATCGAC ACGCACTGGA TCTGGCAGGA CGGCCAGCGG TTGACGCGCG AGCCGCTGCG GATCGTCGGC GGCAGGGTCA AGGTGCCGCA GGCCGCGGGG CTCGGCGTCG AACTGGACAT GGATGAGATC GGCAAGGCGC ACGCGCTGTA TCAGCAGCAT GGCCTGGGCG CGCGCGACGA CGGCGTGGCC ATGCAGTATC TGATCCCGAA CTGGAAGTTT GATAACAGGC GCCCGTGCCT CGTGCGCTGA
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Protein sequence | MSAKPSQSND TPVVTELRVV PVAGRDSMLL NLSGAHGPFF TRNIVILRDS AGHTGVGEVP GGESIRKTID DARALVVGQS IGNLQAVLNK VRTQFAERDA GGRGLQTFDL RTTIHAVTAL EAALLDLLGQ HLGVPVAALL GEGQQRDEVE MLGYLFYIGD RNKTDLDYAS GADARDDWER VRTEQALTPG AVVRLAEAAQ ARYGFNDFKL KGGVLTGDAE IEAVTALAER FPNARVTLDP NGAWSLAEAV RLCRDKHDVL AYAEDPCGAE NGYSGREVMA EFRRATGLPT ATNMIATDWR QMGHAIQLQS VDIPLADPHF WTMQGSVRVA QMCNDWGLTW GSHSNNHFDI SLAMFTHVAA AAPGRITAID THWIWQDGQR LTREPLRIVG GRVKVPQAAG LGVELDMDEI GKAHALYQQH GLGARDDGVA MQYLIPNWKF DNRRPCLVR
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