| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0529 |
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| Symbol | |
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| ID | 4008982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 2778304 |
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| End bp | 2779935 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637952148 |
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| Product | major facilitator superfamily drug efflux transporter |
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| Protein accession | YP_554768 |
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| Protein GI | 91779560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.794253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG ATCCGATCGC ACGGACTGTC GCAAGCAAAA CTCCGCAACC CGCCACCTTC
CTCTCGCGCC GCAAGAACAC CTTGGCGTTG GGCGCGGTAT GTCTCGCGTC GCTCATGTTC
GGCCTCGAAA TTTCCAGCGT TCCCGTGATT CTGCCGACGC TCGAACGCGT GCTGCACGGC
GACTTCAAAG GCATGCAGTG GATCATGAAT GCCTACACGC TCGCGGTAAC AACGGTTCTG
ATGGCGACCG GCACGCTGGC GGACCGGTTC GGCCGCCGGC GCGTCTTCGT GATCGGCATC
GCGCTGTTCG GCATCACCTC GCTGATCTGC GGACTCGCGC CGAGCGTGCC GACGCTGATC
GTCGCGCGCC TGCTGCAAGG CGCGAGCGGC GGCGCCATGC TGATCTGCCA GGTGGCCGTG
CTCTCGCATC AGTTCAGCGA GGGACCCGAA CGCGCTCGCG CATTCAGTGC GTGGGGCATC
ATCTTCGGCA TCGGGCTCGG CTTTGGGCCG GTCATCGGCG GAACGATCGT GGCGCTTTCG
AGTTGGCAAT GGGTCTTCTG GGTGCACGCG CTACTCGCCG CCGTGACCTT GACGCTCGTT
TTCAGCGGCG TGCAGGAATC GCGCGATCCG CACGCGCATA CGCTCGACAT TGCCGGCATC
GTCACGCTCT CGCTGGCGGT TTTCGGCCTC GTGTATTTCA TCACGCAGGT TCCGGCGCTC
GGCTTCAGCG ATCCGCGTGC GCTCTTCATC ATCGCGGCGG CACTGCTCGC CTTCGCGGCC
TTTCTCTTTG CCGAGAAGCT CAGCGCACGT CCCATGTTCG ACTTCGCGGT CTTCAGGATT
CCGCAGTTTT CCGGCGCACT GATGGGCTCG GCGGGTATGA ATTTCAGCTT CTGGCCATTC
ATGATCTATT TGCCGATCTA TTTCCAGATC GGCCTCGGCT ATGACAGCGT GAGCGCCGGG
CTTGCGTTGC TCGCCTACAC ACTGCCCAGC CTCCTGTTTC CGCCGCTCGG TGAGCGTCTC
GCGCTGCGCT ACGGCTCGGG AATCGCCATA CCCGCAGGGC TATTCACGAT CGGCCTCGGC
TTCCTGCTGA TGCGATACGG CAGCAGTGCC GCGCATGCGG ACGTGTGGAC CATGCTGCCC
GGTTGCGTCG TCGCCGGCGC GGGCCTCGGG CTCACCAATA CGCCGGTCAC CAATACGACG
ACCGCCGCGG TTGCCCCGGA ACGCGCGGGC ATGGCGTCCG GCATCGACAT GAGTGCGCGG
ATGATTACGC TCGCGATCAA TATCGCGTTG ATGGGCGCGA TCCTGGTCGG CGGCATTCGC
TTCAATCTGC AGACGCGCTT GCCGAAGACG TTCGACACCG CATTGCTCGG CAGGCTGGCA
GAGAAGATTG CAGCAGGGGA TGGGGAAGCG GTCAGAACGG GAATTCCCGC GTTAGCGCGA
ATCGACTCGT CTGGAAGCAT CGTGCACGCT GCATTGATGC AGGGTTTCGG CTGGGTGATG
GTCTATGGCG GCGTCGGCGT ATGGGTGCTC GCCGTGCTTG GCTTCGTGAT TTCCGGCAGC
GCGTCGCGAA GGCTGAAACA CCAGAAGCAC GCGCCGGCAA CGCAGCAAGC AAGCCGTTGC
GACGCGTGCT GA
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| Protein sequence | MSNDPIARTV ASKTPQPATF LSRRKNTLAL GAVCLASLMF GLEISSVPVI LPTLERVLHG
DFKGMQWIMN AYTLAVTTVL MATGTLADRF GRRRVFVIGI ALFGITSLIC GLAPSVPTLI
VARLLQGASG GAMLICQVAV LSHQFSEGPE RARAFSAWGI IFGIGLGFGP VIGGTIVALS
SWQWVFWVHA LLAAVTLTLV FSGVQESRDP HAHTLDIAGI VTLSLAVFGL VYFITQVPAL
GFSDPRALFI IAAALLAFAA FLFAEKLSAR PMFDFAVFRI PQFSGALMGS AGMNFSFWPF
MIYLPIYFQI GLGYDSVSAG LALLAYTLPS LLFPPLGERL ALRYGSGIAI PAGLFTIGLG
FLLMRYGSSA AHADVWTMLP GCVVAGAGLG LTNTPVTNTT TAAVAPERAG MASGIDMSAR
MITLAINIAL MGAILVGGIR FNLQTRLPKT FDTALLGRLA EKIAAGDGEA VRTGIPALAR
IDSSGSIVHA ALMQGFGWVM VYGGVGVWVL AVLGFVISGS ASRRLKHQKH APATQQASRC
DAC
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