| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0524 |
|---|
| Symbol | |
|---|
| ID | 4008987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2797562 |
|---|
| End bp | 2799250 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637952153 |
|---|
| Product | ABC cyclic peptide efflux pump, fused ATPase and inner membrane subunits |
|---|
| Protein accession | YP_554773 |
|---|
| Protein GI | 91779565 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA TCGTTGCGCT GCTCAAACGT TCGCGCGGCT CGTTCGCGAT CGCGCTGAGC
GCGTGCGTGC TGAACGGCAT TGCCAGCGTG CTGCTCGTTG CGACCTTGAG CCGCGCGCTG
TCGCAACCGG GCGCCGCCGA TATGTCGCTC GCCATGCGTT TTGCGCTGTG CGCGATCGTC
GCGCTCGTCA CGCGTGTGAT TACCGGCGTG CTGTTCGCGC GCCTCTCGCA GGACACGATG
GCGCAGTTGC GCGAACACGT CGCGCGCCGC GTCGCGGAAG CCGAATTGCG CGATGTCGAG
CGCATTGGCG CGGCGCCCGT GCAGTCCGTG CTGACCGACG ACGCCACCAA TGTTTCGATG
CTGTTCTTCG CGCTGCCCAA TCTCGTGATG CACGGCTCGA TCGTGTTCGG CTGCCTCGGC
TATCTGGCGT GGCTGTCGTG GCCGGTCTGT CTGCTCGCGG TGGCCGCGAT CCTGGTCGGC
TCGCTCGGCT ATCACGCCGG CGACAAGCGC GCGATCGCCT CGCTCGAAGC CGCGGGCCGT
TCGCAGGACA AACTGTTCGG CTATCTCGGT GCGCTCTTCA CCGGCGCGAA GGAACTGAAG
CTGCACCAGG CGCGCTCGCG CCAGTTCGTG GACGGCCAGC TCGGCTCGGC CATCGACGAA
GTGCGCGATC ATCGGCGCCG GGCGTTCAGC GCGTATGCGG TCGGGGTCGG CTGGATCGTG
TTCCTGTTTT ACGTGTTTCT CGGTGTCGCG GCGTTCTGGC CGGCACTCGG CGTGCATGCG
GACGCGCCTT CCGCATCGGG CTACGTGGTC GTGTTCCTGT TCATGCTGCT GCCGCTGGAC
GGTCTGCTCA ACAACGTGCC GACGCTGAAC GCGGCACGCG TCTCGCTCGA TCGCATCGAG
AAGGTGATGG GCGAATTCGG CGCGCTGCGC ACCTCGCCGC CGCCCGACGA GAACGCCTCG
CATGCGCCGT ATCGCACTCT CACGCTCAGC AATGTCACGC ACTCGTACTT CCACGAGCGC
GACGAGCGCA TGTTCCGCGT CGGGCCGGTC AATCTGACTT TCAGGCCGGG CGAGCTGGTG
TTTATCGTCG GCGGCAACGG CAGCGGCAAA ACGACGCTCG CGAAAGTGCT CACCGGGCTC
TATGAACCCG AAGACGGCAC CATTGAACTG GACGGCAAAC CGGTCGGCCT CGCCGAACGC
GCCGCGTATC GTCAGCGCTT CACGGCCGTG TTCAACGACT TTCATCTGTT CGACGCGCTG
CTCGGCATCG TCGATCCGAA CGACGCCTCG CGCGCGCAGG CTGACGCCCG CGCCAACGCG
CTGGTGGCGA AGCTCGCGCT CGATCACAAG GTGCAGGTCG TGAACGGCGC ATTCTCGACG
CGAGCGCTTT CCACCGGTCA GCGCAAACGC CTTGCGCTGG TTGTAGCGTA TCTGGAAGAC
CGGCCGTTCT ATCTGTTCGA CGAGTGGGCT GCGGATCAGG ATCCGCAGTT CAAGGCGGTG
TTTTATGAAC AACTGTTGCC GGAGCTGCGT TCGCGCGGCA AGACGGTGCT CGTGATCAGT
CACGACGACC GCTATTTCCA TCTCGCGGAT CGTGTGCTGA AGCTGGAGAA CGGCAGTATC
GTCAGCGAGA CGCATGGCTC GGCACAAGTG GTGCAGAACC CGTCGGCGGC CAACGGTACG
ATGGGTTGA
|
|---|
| Protein sequence | MRLIVALLKR SRGSFAIALS ACVLNGIASV LLVATLSRAL SQPGAADMSL AMRFALCAIV
ALVTRVITGV LFARLSQDTM AQLREHVARR VAEAELRDVE RIGAAPVQSV LTDDATNVSM
LFFALPNLVM HGSIVFGCLG YLAWLSWPVC LLAVAAILVG SLGYHAGDKR AIASLEAAGR
SQDKLFGYLG ALFTGAKELK LHQARSRQFV DGQLGSAIDE VRDHRRRAFS AYAVGVGWIV
FLFYVFLGVA AFWPALGVHA DAPSASGYVV VFLFMLLPLD GLLNNVPTLN AARVSLDRIE
KVMGEFGALR TSPPPDENAS HAPYRTLTLS NVTHSYFHER DERMFRVGPV NLTFRPGELV
FIVGGNGSGK TTLAKVLTGL YEPEDGTIEL DGKPVGLAER AAYRQRFTAV FNDFHLFDAL
LGIVDPNDAS RAQADARANA LVAKLALDHK VQVVNGAFST RALSTGQRKR LALVVAYLED
RPFYLFDEWA ADQDPQFKAV FYEQLLPELR SRGKTVLVIS HDDRYFHLAD RVLKLENGSI
VSETHGSAQV VQNPSAANGT MG
|
|---|
| |