| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0516 |
|---|
| Symbol | |
|---|
| ID | 4008995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2806756 |
|---|
| End bp | 2808477 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637952161 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_554781 |
|---|
| Protein GI | 91779573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0996857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TTGCCAGTCG GACAGCCGTC GCTGTTACGA CATCCACTTT GCTCGCGCTC
TACGGTTGCG GGTCGACTCT TAACACTCCG AGTATCGGCG GGGGCGGGCT AGGGGGGACT
TCGGGGTCGG GTACTTCGGG TACTTCGGGT ACCTCGGGCA CCTCGGGCAC TTCGGGTACT
TCGGGCACTT CGGGCACTTC GGGCACTTCG GGCACTTCGG GTACTTCGGG TACTTCGGGT
ACTTCGGGTA CTTCGGGGAC TTCGGGGACT TCGGGGACTT CGGGGACTTC GGGGACTTCG
GGTACTTCGG GTACTTCGGG TACTTCGGGT ACTTCGGGTA CTTCGGGTAC TTCGGGCACC
TCGGGTACTT CGGGCACCTC GGGTACTTCG GGTACTTCGG GTACTTCGGG TACTTCGGGT
ACTTCGGGTA CTTCGGGTAC TTCGGGTACT TCGGGTACTT CGGGTACTTC GGGTACTTCG
GGTACTTCGG GTACTTCGGG TACTTCGGGT ACTTCGGGTA CTTCGGGTAC CTCAGGCACC
TCTTCCACCC CAGTCGGCAA CATCGTCACC CAGGCCAGTA ACCTCATCAC GGCTGTTGGC
ACCACAGTCG CCGACACCGG CACCAAGGTC TCGGGCACGT CGGTTCCCGG CGTCAACGGC
GCAACGACCG CCAATCTCGG CGCAGCTCTC ACCGACCTCG GCACCGGCGT CAAGGTGCTG
GGCAACGGCA CCGCCGCCGG TCTCGGCACT CTGGGCAGCG CGGCCAATCC GCTCGGCCCG
ACGCTCGACT CCACCGCGGG CGTCGTCTCC AATACCGGCT CAGCCGTCAA GGCACTCGGC
GGCGTCGTGT CGAGTCTCGC CAGCGGCCCG CTGGCACCGC TTGCCCCGGT GACGTCGACG
CTCAGCAGCG TGACCAACGG TCTCGGCGGC GGTATCACCT CAGTCGGCTC GGGACTGAAC
ACCGTGCTCT CCAGCGCGCC GGTCCAGCAA CTCGAGACGC AACTCAGTTC GGCGATCAAC
CCGATCACGC TCGCCGTCTC CAACACGACG CAGACAGTCG GCAACGCAAC GGGATTGGGC
GCACCGCTAA ACAATCTGCT CGGCACGCTC GGCAACGGAG TCAATGCAGC CGGAATCAAA
GTGTCGGGCG CCACCGGCGA TCAGGTCGGC AACGACGTTG GCGCAATCGT GAGTCAACTC
GGCAAAACCG TTACGAGCAC AGGAGGATTG CTCACCGGCG CGACCACCAA TCCGCTCGCG
CCGATCACGG GCCTGCTCGG ACCGCTCGGC GGCATAGGCG GCTCTGGCGG CACGGGCGGC
GGCATCTCGA TCCCGCCGCT GACCGGGCTG GTCGGCAACC TCGGCTCGCT GGGCGGCGCT
ACTGGCGGTT CCGGTGGTAC GGCCGGCGCC GCGGGTCTGC TCGCGCCGAT CGCGGGGCTC
CTCGGCAAGG TCGGCCCGGT GGGCGGCACA CCCGGCACGA GCGGCCCGCT CTCGCCGGTC
GTCACCCTGG TCGGCTCGTT GGCGAGCAAT CTGACCGGCG CAGTCAACGG CGCCTCTCAA
GGTGGCACGC CCGCCAATCC GCTGACTGGT GTTATCAGCG GATTGACCGG TGGCTCCGCC
AGCGGCACAG GCAGCAGCGG TTCAGCCGGC AAGAACCCGC TCGCTCCGGT GACGAACCTG
GTCGGCGGAT TGCTCGGCGG CGTTACCGCG GCCGGCAAAT AA
|
|---|
| Protein sequence | MKKFASRTAV AVTTSTLLAL YGCGSTLNTP SIGGGGLGGT SGSGTSGTSG TSGTSGTSGT
SGTSGTSGTS GTSGTSGTSG TSGTSGTSGT SGTSGTSGTS GTSGTSGTSG TSGTSGTSGT
SGTSGTSGTS GTSGTSGTSG TSGTSGTSGT SGTSGTSGTS GTSGTSGTSG TSGTSGTSGT
SSTPVGNIVT QASNLITAVG TTVADTGTKV SGTSVPGVNG ATTANLGAAL TDLGTGVKVL
GNGTAAGLGT LGSAANPLGP TLDSTAGVVS NTGSAVKALG GVVSSLASGP LAPLAPVTST
LSSVTNGLGG GITSVGSGLN TVLSSAPVQQ LETQLSSAIN PITLAVSNTT QTVGNATGLG
APLNNLLGTL GNGVNAAGIK VSGATGDQVG NDVGAIVSQL GKTVTSTGGL LTGATTNPLA
PITGLLGPLG GIGGSGGTGG GISIPPLTGL VGNLGSLGGA TGGSGGTAGA AGLLAPIAGL
LGKVGPVGGT PGTSGPLSPV VTLVGSLASN LTGAVNGASQ GGTPANPLTG VISGLTGGSA
SGTGSSGSAG KNPLAPVTNL VGGLLGGVTA AGK
|
|---|
| |