| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0476 |
|---|
| Symbol | |
|---|
| ID | 4009035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2848060 |
|---|
| End bp | 2849415 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637952201 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_554821 |
|---|
| Protein GI | 91779613 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGA TACTCGACCA GATTGAAGAG GCCAGCCCCG CGATTTCGTA TGCGGGGCTG
ATCGAGCGGA TCGAGATTTT GCGCTCCACG TTGCGCTGGT CGTCGCGGCT GGAGCGCGCG
GACGTCGACA AACTGCTGCG GCAAGCCACC TCGCTGCGCG ACGAAGTGAT GCAACTATCG
CACAAGGAGC GCTTCGTGCA GGCGGCAGTG GCCGCCGAGC CGCAGGAGCG CGTCGATCAA
TCGCGCGGTG CGCGGCGCAA AGCACTGCTC GAACGCAGCT TCATTTTCGA AGGGACGTTC
GGCGACAATC CGCGTTTGCT CGAATCGCTC GAAATTGCCG AAAAAGCGGC GCCGACCGAT
CTACCCGTGC TGATCGACGG CGAAAGCGGC ACCGGCAAGG AACTGATGGC GAAGGTGATT
CACGCCAACG GCTCGCGTGC CGACAAACCG TTCATTTCCG TGAATTGCGG CGCGATTCCC
GACAATCTGC TGGAGTCGGA ACTGTTCGGG CATCGCAAAG GCGCGTTCAC GGGGGCTTCA
AACGACCGCA AGGGGAAATT CGAAAGCGCG CATACAGGTA CCATTTTTCT CGACGAGATC
GGCGAGTTGC CGCTCGCCGG CCAGGTGAAG CTGCTGCGCG TGCTGGAAGC GCATGAGATT
CAGCGCGTCG GCTCAGACGA AACGATTGCG GTGGATACGC GCATCGTCGC GGCGACCAAT
CGCAATCTGC GGCAACTCAG CGAAGAGGGC AAGTTTCGCG AGGATCTGTT TTACCGGCTC
AGCGTGATTC ATGTCACGCT GCCGCCGCTG CGCGAGCGTC GCGATGAAAT TCCATTGCTG
ATTGCGTGGT TCGGCGATGA AGCGGCCGGC ACGTTGAAGC GCAGGCCTGT GCGGATGACG
CCGCGTCTGC GGGACTTTCT GCTGAACTAT GCATATCCGG GCAATATCCG CGAACTGCGC
AACGTGATGT ATCGCGTCTC GTGTCTGGCC GGCGATATGG CCGATATCGA TCACTTGCCG
CTGGACATGC GGCCGGCGGC GCCCGGCTCT GCCGCGTCGT TCAACGCACC GGGCGCAACC
GGGCAGGAGC CAATCAGCGT GACGAACCTG ATGTCGCTGA GCGACGCCAA GCGCGCCGCC
AGCGACGACG CCGAAAAGGC CTTTCTCGAA CGCGGCCTTC GCGAAGTGAG CGGCACGGTT
GCGGAACTGG CCCGCCGTAT CGACATGAAC CGCTCGCATC TGCAGATGCT GCTGAAGAAG
CATGGTCTGC ATTCAAAGGA TTTTCGCAAC CGTAATCAGC CGGCCGCGAC CAGGAACGGC
GCGGACGATC ACGACGACGA AGAAGGCGAG ACGTAA
|
|---|
| Protein sequence | MMKILDQIEE ASPAISYAGL IERIEILRST LRWSSRLERA DVDKLLRQAT SLRDEVMQLS
HKERFVQAAV AAEPQERVDQ SRGARRKALL ERSFIFEGTF GDNPRLLESL EIAEKAAPTD
LPVLIDGESG TGKELMAKVI HANGSRADKP FISVNCGAIP DNLLESELFG HRKGAFTGAS
NDRKGKFESA HTGTIFLDEI GELPLAGQVK LLRVLEAHEI QRVGSDETIA VDTRIVAATN
RNLRQLSEEG KFREDLFYRL SVIHVTLPPL RERRDEIPLL IAWFGDEAAG TLKRRPVRMT
PRLRDFLLNY AYPGNIRELR NVMYRVSCLA GDMADIDHLP LDMRPAAPGS AASFNAPGAT
GQEPISVTNL MSLSDAKRAA SDDAEKAFLE RGLREVSGTV AELARRIDMN RSHLQMLLKK
HGLHSKDFRN RNQPAATRNG ADDHDDEEGE T
|
|---|
| |