| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0475 |
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| Symbol | |
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| ID | 4009036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2849415 |
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| End bp | 2852471 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637952202 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_554822 |
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| Protein GI | 91779614 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.977404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAC CCCAGACCGC GCCTTCCGCA GCCGAGTTTC TGACCTCGGT GGAAATTCTT
TCGCCGTTTT CGCGCGACGA GATCGAGCGC CTTGCCGACT ATGCGCAAGC GCGCTTCTAT
TCGTTCGGCG AAACGGTCTG CTCCGCGGGT GAGACGGCCG ACGGGCTATA CGTGGTTCGC
TCGGGCTCCG TGCGAATTTT CACGGAGGAG CACGGCAAGG AAACCAGCAT GGGGGTGCGC
AAATCGGGCG AGATCTTCGC CGATATCGCG ATGTTGCGCG CCTATGTTCA CGAAGCGTCG
GTGCGGGCGT CGGCGAAAAC CGAGTTGCTG TTCATTCCGC GCGCCGCGAT CGAACCGGTG
ATCGCCGGCA ATCAGGCCGC GCTGGCGTTC GTCGCCAGTT ATGTGGCGAT CAACTCGGCG
GGCGGTTTCG TCGCGCAACT GTTCGATCTG CGCGGCAAGC TGAACAAGGC GGAACTCGAA
GAGTATGTGC GCAGCGTTGG CGTGAAACGG GTTGCGGCGG GCAAGGAGAT TCTCAAGCAG
GACGGACGCG AGGACCGGCG GCTGTATGTG GTGCGGCAGG GCGAAGTGCG TATTGTCCGG
CATGAGGAAG GTCATGACTA CACGCTCGCC ACGCTCGGCG AAGGCGAGAT ATTCGGCGAG
AAAGCGTGCC TGATGCGCCA GGAGCAGATG GCCTCGGTTG TCGCGACGGC CGATACGCGG
CTACTGGTGA TTCCCGAGCG CACGGTCCAT TTTATTCTCG AACGCAATCC GAAGCTGCGC
GAAGTACTCG ACGAGCGGAT CCGTTACGGC GACCGTGAAT TGCAGCGGCA AAAGCGGCTC
GAACAACGGC GCAAGCTGCC GCTCATGCTC GATCTGCAGA CCAAACCCGA GTTCGGCGAG
AAGGTCATCA AACGCTTCGC GCTGGTGGAA CAGGCCGAAG AAATGGATTG CGGCGCGGCG
TGCCTTGCGA TGATATGCCG CCACTACAGC ATTCCGATGA CGCTCGGCAA ATTGCGCGAA
CTCGCCAACG TCACCACTCA GGGCGCCACG CTCGACAGTC TCGCGCGAGC GGGTGAATCG
CTCGGCTTCA CGGCGCGCGG CGTGCAATGC ACGTTCGATT CGTTGCGCGG CTTCGATCTG
CCGTTCATCG TGCACTGGGA GGGTTACCAC TATGTGGTGG TATACGGGCT CTCCAAAGAT
TATGTGTGGG TGGCGGACCC GGCGGTCGGC TTCAGGAAGA TGACCGTCGA AGATTTCGAA
CGCGGCTGGA GCGGCACCTG TCTGCTGTTT ACCGGCGGGC CGAATCTGCT GCAAATGTCT
GCCGCGCGTT CACCGTGGAT TCGTTTTGTC GGCTACCTCA CGCCGTACAA GAAGATTCTC
GGCCACCTGT TTCTCGCCAC CTTCGTGATT CAGGTATTGG GCGTGATTCC GCCGCTGATT
ATCCAGAACA TTCTGGACGG CGTGATCGTG CATCAGAATG TCAGCCTGCT GCATCTGCTG
ATTGGCGGCT TGATTATTGC CAATGTCTTT TCGCAATTGA TGTCGTCGAT TCGCGCCTAT
CTGGCCAATT TCATGGTGCG CAATATGGAC TTCGCGATGA TGTCGCAGTT CTTCAAGCAC
ACCCTGTCGC TGCCATTCTC GTTCTTTGCC AAGCGCAAGA CCGGCGACAT TTTCGCGCGC
TTCCAGGAGA ATCAGACGAT CCGCGCTTTC CTGACCGAAT CCACCGTCAC CACGGCGCTG
AACCTGCTGA TGGTGTTCAT CTACTTCACG ATCATGTTCG TCTACAACGT GAAGATGACA
CTGGTGCTGA TTGCGTTCAT CATTCCGATC ATGGCGCTGA CCGCGATCGC CACGCCGAAG
ATCAAGGGCT ATGCGCGCGA AGTGTTCACC GCGTCGACCG AATCGAAGTC GTTTCTGATG
GAAGCCCTCG CCGGCGTGGA GACCATCAAG GGCATGGGTA TCGAACGGCC GGTGCGCTTG
CGTTGGGAGA AGAAGTACGC AAAGGCGCTC GAAGTGCAAT ATCGCGCGCA TGCGTTCAAC
ATTCTCGTGG GACTCGGCAG TCAGTTGCTG AATGCGGCGA CGACGATTGC GATTCTCTGG
GTCGGCGCGA ATCTCGTGCT GGCGCGTGAA ATGACGATTG GCCAATTGAT CGCGTTCAAC
GCATTCATGG GCAGTGTACT GGGTCCGTTA ATGGGCCTGG TCGGCTTGTG GAGCATGCTG
AACGATGCGG GCGTGGCAAT GGAACGCCTT GGCGATGTGC TCGATATCGA ACCCGAGCAG
AAGCCACAGG ATTTGCCCTC GCGTGTGATG CTGCCCGAAC TCCAGGGCGA AATCAGTCTG
AGCGGCGTTT ATTTCCGTTA CGGCGAAAAC GACTCGGCCT ACGTGCTCGA AAACATCAGC
TTCGACATCA AGCCGGGTGA ACTGGTGGCG ATCGTGGGGC GCAGCGGTTC GGGCAAGACC
ACGCTCGCCA AGTTGCTGGT CGGCTTCTAC ACGCCGACCG AGGGCAAGAT GACGATAGAC
GGCTACGATC TCGGCGTGGT CGATAAAGCC TATTATCGCG CGCAGATCGG CTATGTGATG
CAGAGCAACC TGCTGTTTTC CGGCACGATT GCCGAGAATA TCGCGAGCGG CGACGATGCG
CCCGATCGGC GCCGCATCGA GGAAGTGGCG AAGATGGCCG ACGCGCACGC GTTCATCAGC
AAGATGCCGC TTGGCTACGA GCAGATTGTC GGCGAGCGCG GAATCGGCTT GTCCGGCGGG
CAGATCCAAC GGTTGTGCAT TGCGCGGGCG CTGTATCACG ATCCGCGACT ACTGGTATTC
GACGAAGCGA CTTCGGCACT GGACTCGCAA TCGGAAAGCA ATATTCTCGG CAATATGCAC
GACATTCTGA AAGGCCGCAC GGCGGTGATC ATTGCGCACC GGCTCAGCAC GATCATGCGT
GCGGACAAGA TTCTCGTGCT GTACGAAGGG GCGATTGTGG AACAGGGCCG TCACGAAGAG
CTGATTCAGC GCGGCGGCAT GTATTACCAG CTGGTCCAGA AACAGTTGAG TGCGTGA
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| Protein sequence | MDAPQTAPSA AEFLTSVEIL SPFSRDEIER LADYAQARFY SFGETVCSAG ETADGLYVVR
SGSVRIFTEE HGKETSMGVR KSGEIFADIA MLRAYVHEAS VRASAKTELL FIPRAAIEPV
IAGNQAALAF VASYVAINSA GGFVAQLFDL RGKLNKAELE EYVRSVGVKR VAAGKEILKQ
DGREDRRLYV VRQGEVRIVR HEEGHDYTLA TLGEGEIFGE KACLMRQEQM ASVVATADTR
LLVIPERTVH FILERNPKLR EVLDERIRYG DRELQRQKRL EQRRKLPLML DLQTKPEFGE
KVIKRFALVE QAEEMDCGAA CLAMICRHYS IPMTLGKLRE LANVTTQGAT LDSLARAGES
LGFTARGVQC TFDSLRGFDL PFIVHWEGYH YVVVYGLSKD YVWVADPAVG FRKMTVEDFE
RGWSGTCLLF TGGPNLLQMS AARSPWIRFV GYLTPYKKIL GHLFLATFVI QVLGVIPPLI
IQNILDGVIV HQNVSLLHLL IGGLIIANVF SQLMSSIRAY LANFMVRNMD FAMMSQFFKH
TLSLPFSFFA KRKTGDIFAR FQENQTIRAF LTESTVTTAL NLLMVFIYFT IMFVYNVKMT
LVLIAFIIPI MALTAIATPK IKGYAREVFT ASTESKSFLM EALAGVETIK GMGIERPVRL
RWEKKYAKAL EVQYRAHAFN ILVGLGSQLL NAATTIAILW VGANLVLARE MTIGQLIAFN
AFMGSVLGPL MGLVGLWSML NDAGVAMERL GDVLDIEPEQ KPQDLPSRVM LPELQGEISL
SGVYFRYGEN DSAYVLENIS FDIKPGELVA IVGRSGSGKT TLAKLLVGFY TPTEGKMTID
GYDLGVVDKA YYRAQIGYVM QSNLLFSGTI AENIASGDDA PDRRRIEEVA KMADAHAFIS
KMPLGYEQIV GERGIGLSGG QIQRLCIARA LYHDPRLLVF DEATSALDSQ SESNILGNMH
DILKGRTAVI IAHRLSTIMR ADKILVLYEG AIVEQGRHEE LIQRGGMYYQ LVQKQLSA
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