| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0473 |
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| Symbol | |
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| ID | 4009038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2853329 |
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| End bp | 2854702 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952204 |
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| Product | secretion protein HylD |
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| Protein accession | YP_554824 |
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| Protein GI | 91779616 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.150139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG ACAGTCACCC TAGACCGTTG TCGGAGGCGC TGGAAGATCA CAGCGTCGAG
GGCATTGCGA TTCTCACGGC GGAGCCGGTG AGGATTGCGC GCGCGCTGAT CTGGGCGATG
GTCGCGCTGG TCGTGGTCGG CCTGTTGTGG TCGTTCGTGG GGCGTGCGGA TGTGATCGTC
AGCGCGCAAG GCACCCTGTC GCCGGAATCG GAGGTGCGCC GGATCTATGC GCCGATCGAC
GGCGAGCTTG CCGATCTGTA TATCGCCGAG GGGCAACCCG TATCGAAAGG CGATGTGCTG
GCGCGGTTGA ATGCGCGCGG TGCGATCGAG GCCGCCAGCA ATGCATTGCA AGCGCAACTC
AAGCTGGAAG ACGCCGAGCG CGACTGGAAG CAGTTCCCCG AGAAGAAAGC GCTGATGGAG
CGTAAGGCGG CCGCGCTCAA GGCGCAGATG GAGGTGGAAG CACGCCAGCA CGAAAATCGC
GTCTCCGAAG GCACGACCAA ACTGGCGGAA GGGCAGAAAG CCGAACTCGA CGAAGCGCGC
AGCGTGCTCG ACAATGCCCG TCGCACGCGT GAAGCGGCAC GTCAGGAATT GGACCGCTAT
TCGCGGCTGT TCGCGCAGCC GGGCGGAGGC GGTATCGCCG AATTGCAGGT GGAGCAGAAA
CGCACTGCGG CGATGGAAGC GGATAACGCG TACCGTGTCG CGCAATCAAA ACTCGCGGAG
CTGGATTTCC GCCTGAGCCA CGAATACGCA CAGGCGAATG CGCAATTGGA AACCAGTGGC
CAGCAGACCA CCGACCTGCA GCTTCAATAC GATTCGGCGG TGCGCGACAT TACCGACGCG
GAAGACAAGT TGCGCCTGCA ACTGCAAAGC GCGCGGCTGG TGTCCGAGGC GGCCGCGCGG
ATTCGCTTCG AGAATATCGA CAAGGACAAT TTTCTGCTGA TCCTCGCGCC GGTTTCGGGC
GTCATTACCG ACGTGACGTC GACGCAGCGC GGCGACAAGA TTCAGGCGAA CGCGCCGCTC
GGCGGCATTG CGCCGAAAGA CGCACGGCCC GTGCTGAAAA TAGAAATTGC CGAACACGAT
CGGGCTTTCC TGCACGAAGG CCTGCCGGTC AAGCTGAAAT TCAATGCGTT TCCCTATCAG
CGCTATGGGC TGATCAACGG CACGCTGGCC TATATTTCGC CGGCCACCAA GCCGTCGTCG
ACGGACAAGC AGCCGGTCTA CGAAGGCCGC GTCACGCTCG ACAAGGATTA CTACCAGATT
GCCGACACGC GCTATCCGTT GCGCTACGGC ATGACGGCAA GCGCCGAGAT CGTGGTGCGC
GAGCGCCGCC TGATCGACCT GGGTCTCGAT CCGTTCAGGC AGGTGGCGGG TTGA
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| Protein sequence | MKRDSHPRPL SEALEDHSVE GIAILTAEPV RIARALIWAM VALVVVGLLW SFVGRADVIV
SAQGTLSPES EVRRIYAPID GELADLYIAE GQPVSKGDVL ARLNARGAIE AASNALQAQL
KLEDAERDWK QFPEKKALME RKAAALKAQM EVEARQHENR VSEGTTKLAE GQKAELDEAR
SVLDNARRTR EAARQELDRY SRLFAQPGGG GIAELQVEQK RTAAMEADNA YRVAQSKLAE
LDFRLSHEYA QANAQLETSG QQTTDLQLQY DSAVRDITDA EDKLRLQLQS ARLVSEAAAR
IRFENIDKDN FLLILAPVSG VITDVTSTQR GDKIQANAPL GGIAPKDARP VLKIEIAEHD
RAFLHEGLPV KLKFNAFPYQ RYGLINGTLA YISPATKPSS TDKQPVYEGR VTLDKDYYQI
ADTRYPLRYG MTASAEIVVR ERRLIDLGLD PFRQVAG
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