| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0421 |
|---|
| Symbol | |
|---|
| ID | 4009090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2906903 |
|---|
| End bp | 2907676 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637952256 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_554876 |
|---|
| Protein GI | 91779668 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTA CGGTGTTGGT AACGGGCGCT TGCGGCGGCA TCGGCAGCGT GTTGTGCAAG
CGTTTCGTGG AGCAGGGCGA TACGGTGCTG GCGCTCGACA TCGACGCCGC GGCGCTGAAC
GCGTTGACCG CACAACTCGG CGAGGCGCAT GTCACGCCGG TCGCGGTCGA TCTCGGCGAT
GCCGCCGCGG TGCAGCGGGC AGTGGCCGCG GCAGTCGAGG TGCGCGGTCC GGTCGACGTG
CTGGTCGCCA ACGCCGGCGC GGCACAAGGT CTGACGCTGG CCACGACGGA TGCCGCGAGC
TGGCAGCGCG ACATTCATCT GAATCTGAAC GGCACGTATC ACACGGTTGA AGCCGTGCGC
GCGTCCATGA TCGAGCGGCA GCGGGGCGTG CTGGTGCTGA TCGGCTCGGT GAACGGCATG
GCCGCGCTCG GTCATCCGGC CTACAGTGCG GCGAAGGCCG GGCTCATCGG TTATACGAAG
GCGCTCGCGC TCGAACTGGG CCGCTACGGC ATTCGCGCCA ACATCGTGTG TCCGGGCACG
GTGAAGACGC AGGCGTGGCA GGCGCGCGTC GAGAAGAATC CGCAGGTCTT CGAAGACCTG
AAAAAGTGGT ACCCGTTGCG CGATTTCGCG ACGCCCGACG ACATTGCCGA CGCGGTACTG
TTTCTCGCCT CGCCGATGGC GCGCGTGATT ACCGGCGTCG CGTTGCCGGT GGACGGCGGC
CTGATGGCTG GCAACCGTCT GATGGCGGAA GAACTGACGC TCGAATCGCT CTGA
|
|---|
| Protein sequence | MNRTVLVTGA CGGIGSVLCK RFVEQGDTVL ALDIDAAALN ALTAQLGEAH VTPVAVDLGD
AAAVQRAVAA AVEVRGPVDV LVANAGAAQG LTLATTDAAS WQRDIHLNLN GTYHTVEAVR
ASMIERQRGV LVLIGSVNGM AALGHPAYSA AKAGLIGYTK ALALELGRYG IRANIVCPGT
VKTQAWQARV EKNPQVFEDL KKWYPLRDFA TPDDIADAVL FLASPMARVI TGVALPVDGG
LMAGNRLMAE ELTLESL
|
|---|
| |