| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0409 |
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| Symbol | |
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| ID | 4009102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2918726 |
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| End bp | 2920657 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637952268 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_554888 |
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| Protein GI | 91779680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA GCGAACCAGG GTCTCCATTT TTCAGGTGGG TCGTCTCTTC CTCCCAGAGT
CTGAGCGCGG ACAATCGGCA GATATTGCTG GCCAACCTGT TCACGCGAAC CTCGTCGATC
GTGTTTGCGT CGGTCTGTGA AATCAGCGTC TGCGCAACTG CTTACTACCT TCATCCACGC
CCCCTTTACG CCGTTTGGGG CAGCGCAGTC GTCGCGTTGC TGATCGCCCG GCTCGCGTTG
ATCTGGTTGT GCTGCTCGCG CAGTGCCAGC AGCGAGCCGA CCCCCACCTC GGCATTTCTG
TTTGCGAGCC TGCTCTGGAG CGCGCTGTTC GGTTTCGGCG CGCTGCTCTG CAATGTCAGT
GGAGATCAAA CGCTATTCCT GCTCGGCAAC GTGTGCGCAG TGGGCGTTAT CGGCGGATTG
GCCGGACGGA ATGCGGGTAC GCCCCGGCTC GTCATGCTGC AGATCACCTT TATTCTTTTG
CCATTGGCGC TCGGCGCGGC GCTCTCTCCC GGTTCAGGCA AACTGGTGCT GCTGTTTCAG
GCTCCTTTCT GCGCCGCCGG CTTTTTTACG GTTGCGCTGC GCAGCAATCG CGACACGGTG
GCGTTGCTTC TGGCACGGGA AAGCAGCCAT CGTCTCGCTC ATCACGACAG CCTCACGGGC
TTGCCTAACC GCGCGCGTCT CAGCGAGCTG CTGCTGGAGC GCACCGAGAT GGGCGCGGTC
AGCAGAGACC AGTCGTTTGC TGTTTTACTG ATCGATCTGG ACGGATTCAA GGCCATCAAC
GACAGTCTCG GCCACGCGGC CGGCGATCAG ATTCTTCAGG AAGCGGCTAT CCGATTGCGC
GAAGTATTGC CGAGCGGCGA TCTCGTCGGG CGCCTCGCCG GCGACGAGTT CGTGGCGCTT
TGCGATGGCG CGGGGCAGGC GCGCGACGTC CGGATTCTCG CGGATCGCAT CGTGAAAACA
CTGGCGCGCC CGTTCGCGCT GCGCGAGGCG CTGGTGCATA TCGGCGCGAG CGTAGGCGTC
TCGCTCTATC CCGACCACGC GAGAACCGGT CCGCAGTTGC TGATTTGCGC CGATCGCGCT
TTATATGCCG TGAAACGCAG CGGCAAGAGC GCGTTTGCCA TTTTCGATGG CACCAGGCAC
GCGTCGGATG AAAGCCTGAG CCTGCTGCGC AGCGATCTGG AAGGCGCGCT GCATTCGTTC
AGCGGCTTGC GCATGGAGTA TCAGCCCATT GTCGATCTCA GCAGCGGCGC GGTGTGCGGC
CGCGAGGCGC TGATACGCTG GACCCACCCG ACCCGCGGCG AACTCCCGCC CTCCTCATTC
ATTCCTACTG CCGAACGCAC AGGCCTTATT CTGGCGTTGG GACAGTGGGC TTTGCTGCAG
TCGTGCAAGG AAGCGGTGAC CTGGCGCGAC AAGGTCACCG TCGCCGTCAA CGTGTCGCCG
GTGCAATTGA GGGAGGAGTC GTTTGCTTCG ACTGTCGCGG GGATTCTTCG CAAGACCAGA
CTGCCGCCGC AGCGTCTGAA TATCGAGGTC ACGGAAACCG TATTGTTGAA TGACGACGTC
GTGACCCGGC GCAACGTCGC GCGGCTGCGA GCGTTGGGCA TCGGCCTCGC ACTCGACGAT
TTCGGCACAG GCTTTTCGAC CATGTCGACC CTCGTGCGTT TCTCATTCGA CGAGCTCAAG
ATAGACAGCT CATTCGTCAA GGAGTCCGTG CATCGTCGGG AATCCGCCGC GGTGGTACGC
GGGATCGTGG CATTGGCGCG AGAAATCGGC TTGCCGACTA CGGCGGAAGG CATCGAAACG
CAGGAGCAAC TGGACTTCGT GCGCGTATGC GGATGCACGC ATGCTCAGGG TTTTCTGCTT
GGCAGGCCGG TGCAAGGGCA TGAGATCGCG CAGATCGAAG AAAACACTGC CACACATTCC
GCGAAGGAAT GA
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| Protein sequence | MAFSEPGSPF FRWVVSSSQS LSADNRQILL ANLFTRTSSI VFASVCEISV CATAYYLHPR
PLYAVWGSAV VALLIARLAL IWLCCSRSAS SEPTPTSAFL FASLLWSALF GFGALLCNVS
GDQTLFLLGN VCAVGVIGGL AGRNAGTPRL VMLQITFILL PLALGAALSP GSGKLVLLFQ
APFCAAGFFT VALRSNRDTV ALLLARESSH RLAHHDSLTG LPNRARLSEL LLERTEMGAV
SRDQSFAVLL IDLDGFKAIN DSLGHAAGDQ ILQEAAIRLR EVLPSGDLVG RLAGDEFVAL
CDGAGQARDV RILADRIVKT LARPFALREA LVHIGASVGV SLYPDHARTG PQLLICADRA
LYAVKRSGKS AFAIFDGTRH ASDESLSLLR SDLEGALHSF SGLRMEYQPI VDLSSGAVCG
REALIRWTHP TRGELPPSSF IPTAERTGLI LALGQWALLQ SCKEAVTWRD KVTVAVNVSP
VQLREESFAS TVAGILRKTR LPPQRLNIEV TETVLLNDDV VTRRNVARLR ALGIGLALDD
FGTGFSTMST LVRFSFDELK IDSSFVKESV HRRESAAVVR GIVALAREIG LPTTAEGIET
QEQLDFVRVC GCTHAQGFLL GRPVQGHEIA QIEENTATHS AKE
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