| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0370 |
|---|
| Symbol | |
|---|
| ID | 4009141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2962499 |
|---|
| End bp | 2963668 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637952306 |
|---|
| Product | OmpC family outer membrane porin |
|---|
| Protein accession | YP_554926 |
|---|
| Protein GI | 91779718 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.166204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAAA AGTTATTCAT CATGGCGGCT CTCATGGGCG GGAGCGGTCT CGTTCATGCG
CAGAGTTCGG TCACGCTGTA CGGGATCATC AACGAGGCTA TCACCTACTC GTCGAACCAG
GGCGGCCATA GCGCGGTGCA GTTGACCGGC AACGGCGAGT ACGGCAGCCG CTGGGGACTG
CGAGGCGCCG AAGACCTGGG CGGCGGCACC AAGGCGATCT TCACGCTGGA GAACGGCTTC
AATCCGGTCA GCGGCGCGCT CGGACAGAAC AACCGCATGT TCGGCCGCCA GGCTTTCGTG
GGTTTTTCGA ATCCGAACTA CGGCACGCTG ACGTTCGGCC GCCAGTACGA CGCGATCGTC
GGCACCTTGC AGACCATGAC GTCCAACGGT GCGTGGGGCG GCGTGATGTT TTCGCATCCG
TACGACAACG ACAACACCGA CGACTATTTG CGCGTCAACA ACTCCGTCAA ATACGTCTCG
CCGAATCTGA AGGGCTTCAC CGGCACGGCA ATGTACGCGT TCAGCAACGC GCCCGGCGCG
TTTGCCAACA ATCGCATGTG GTCGGTAGGC GGTATCTATT CGCAGGGTGC CTTTTCGATT
GCGGCGGCGT ATTCGCTTTA CGACCAGCCG GGCGTGAACA CCACGGCGAA CGTGAACACC
AATGGCGCGA TTACCTGCTG CGATGCGCCG ATCACGTCCA AACGCGAGCA GATTGCGGGC
ATCGGTGCCT CGTATGTGAT CGGACCGGCC AAGCTGAGCC TGATGTACAG CAACGCGATC
TACAACAACG TGGGCACGAC GCTGACGAGC GGCATCAACT ATCGCTTCAA CAACTATGAA
GCGAATGCGC GCTTCACGCT CGACCCGACG CTGTTCTTCG GCATGGCCTA CACGTACACG
AGCGACGACA TCACCGGCGG TCCTGGCGGT CCCACGCAGG TGCACTGGCA TCAGGTCAAT
CTGCTGGTCG ACAAGTTCCT GTCCAAGCGC ACCTCCATCT ATACCGAGGT GATCTATCTG
CGTGCGGCCG GCGGCGGCTT TTCCCGGCCG ACGGGCGGAC CGTTGCCGGC GACTTCGAAC
GGTCTGCTGG CCTCGCAGAT TCAGACCATG TTGCCGTCTT CGGGACAGAA CCAGGCGGTG
GTCAGCGTCG GGCTCGTGCA CAAGTTCTAG
|
|---|
| Protein sequence | MKEKLFIMAA LMGGSGLVHA QSSVTLYGII NEAITYSSNQ GGHSAVQLTG NGEYGSRWGL
RGAEDLGGGT KAIFTLENGF NPVSGALGQN NRMFGRQAFV GFSNPNYGTL TFGRQYDAIV
GTLQTMTSNG AWGGVMFSHP YDNDNTDDYL RVNNSVKYVS PNLKGFTGTA MYAFSNAPGA
FANNRMWSVG GIYSQGAFSI AAAYSLYDQP GVNTTANVNT NGAITCCDAP ITSKREQIAG
IGASYVIGPA KLSLMYSNAI YNNVGTTLTS GINYRFNNYE ANARFTLDPT LFFGMAYTYT
SDDITGGPGG PTQVHWHQVN LLVDKFLSKR TSIYTEVIYL RAAGGGFSRP TGGPLPATSN
GLLASQIQTM LPSSGQNQAV VSVGLVHKF
|
|---|
| |