| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0348 |
|---|
| Symbol | |
|---|
| ID | 4009163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2986995 |
|---|
| End bp | 2987885 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637952328 |
|---|
| Product | procollagen-proline,2-oxoglutarate-4- dioxygenase |
|---|
| Protein accession | YP_554948 |
|---|
| Protein GI | 91779740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.470806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATAA CCGTTAGTTT TCCCGCCGAA GTGCGCGACT GGATCGCCCA GAATCTCACG
CGCGGCGTTG CCCCACAGGC GATTGTGCGC GAGCTGGTCG ATCGAAAAAA TGCAGTCGAA
CTCGCGTCGG CGATGGTCAA CGCGGTCGCT TCGTCTTTCC TGTACGGCAC CCCGCTGCCG
GGCGAGACAC TCGAAATCGG CGCCGCGCCG GTTGCTTACG AACCGGAGCC GCTGCGCGTG
CCGGACGGAC CGCTGATCCG GCTCGGCGAG CGCAAGACTC GCGTGATTTC GCGCATGCAG
CGGCCGGCCG CGGTACTGCT CGACGATTTT CTGAGTGCAA ACGAATGCGA GCAACTGATC
GCGCTCGCGC GGCCGCGTCT GAGCCGTTCG ACCGTGGTCG ATCCCGTGAC CGGCCGTAAC
GTCGTAGCCG GCCACCGCAG CAGCGACGGG ATGTTTTTTC GTCTGGGCGA GACGCCGCTG
ATCGCGCGCC TGGAAGCGCG GATCGCCGAG CTCACGGGTC TGCCTGTCGA GAACGGCGAA
GGCCTGCAAC TGCTGCACTA CGAAGCGGGT GCCGAATCGA CGCCGCACGT CGACTATCTG
ATCGCGGGCA ACCCTGCGAA TCGGGAGTCG ATTGCGCGCA GCGGGCAACG CGTGGGCACG
CTGCTGATGT ATCTGAACGA CGTGGAAGGC GGCGGTGAAA CCATGTTCCC GCAAACCGGA
TGGTCGGTGG TGCCGCGGCG CGGCCAGGCG CTCTATTTCG AATACGGCAA CCGGTTCGGG
CTAGCCGATC CGAGCTCGCT GCATACGAGC ACACCGCTGC GGGCGGGCGA GAAGTGGGTG
GCCACCAAAT GGATCCGCAC CCGGCGCTTC GTGCCGCGCG ATCAGGCGTA A
|
|---|
| Protein sequence | MSITVSFPAE VRDWIAQNLT RGVAPQAIVR ELVDRKNAVE LASAMVNAVA SSFLYGTPLP
GETLEIGAAP VAYEPEPLRV PDGPLIRLGE RKTRVISRMQ RPAAVLLDDF LSANECEQLI
ALARPRLSRS TVVDPVTGRN VVAGHRSSDG MFFRLGETPL IARLEARIAE LTGLPVENGE
GLQLLHYEAG AESTPHVDYL IAGNPANRES IARSGQRVGT LLMYLNDVEG GGETMFPQTG
WSVVPRRGQA LYFEYGNRFG LADPSSLHTS TPLRAGEKWV ATKWIRTRRF VPRDQA
|
|---|
| |