| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0310 |
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| Symbol | |
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| ID | 4009201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 3025784 |
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| End bp | 3027748 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952366 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_554986 |
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| Protein GI | 91779778 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACG TTTCGCAAAA CCAGCACATT GAACGCGTGA GAGGCGCCAT TGAAGGACGG
CTTCCCGCGC CCGCCGATTC CACGCGCCTC GTATCGTCGT GGCAGCGTTC GTTCGAACAA
TACCGGCTCG ATCCCGGCGC GGTGATCGGC CCACGCGTTC TTACATCGGC TGAATTGCGC
GAAGTGCAGG GCAAGGAAGA AGCTTTCCTG CGTGCGTCAG GCCAGTGCCT GACCCGCCTG
CACGACATGA TTCGCGTCGC CGATTATTGC GTGATGCTCA CGGACGCGCA CGGCGTGACG
ATCGACTACC GGATCGAACG CGAACGCCGC AGCGATTTCA AGCATGCGGG ACTGTATATC
GGTTCATGCT GGTCGGAACG CGAAGAAGGC ACATGTGGTG TGGCAAACGT GCTGACCGAC
CTCGCGCCGA TCACTGTGCA CAAGACCGAT CACTTCCGCG CCGCCTTCAC GACCTTGACC
TGCAGCGCCG CGCCGATTTT CGCGCCGACC GGCGAAATGA TCGGCGTGCT CGACGCTTCC
GCCGTGCGCT CGCCGGATAA CCGCGACAGT CAGCGGCTCG TGTTTCAACT GGTGCGCCAG
AGTGCCGGCC TGATCGAGGA CGGCTATTTC CTCAATCAAA CCACTCAGCA TTGGATTCTG
TTCGGCCATT CGAGCCGTAA CTTCGTCGAA GCGCAACCCG AGGTGCTGAT CGCTTTCGAC
GAATGCGGCA ATCTGGTCGC CGCCAATCGC AAGGCGCGCG AATGCATTCC GGCGTTGAAC
GGTCCACGCC ATATCGACGA TATCTTCGAC ACGGCCCACG TGCGTCTGCA CGACGTCGCG
CGTACCGATG CGATTGTCTG CTTGCGTCTG CGCGCGACGG GTGCCACTTT GTATGCGCGC
ATTCGTGCGC CGCTCAAACG CACTTCACGC GCGGCAAACG GCACGTCGGC CGGTGCCGGC
CCGCAATCGC ACAGCGAGAC ACAGGACGGT CTGCATCTCG GCGCCTTGGG CCGCTTTCTG
AAAAGCTCGG ATGCTCGCAT CGCACACAAC GCGTCGGTGG CGTTGCGCAT TATCGGTAAA
CGGCTGCCGA TTCTGATTCT CGGCGAGACC GGCGTCGGCA AGGAAGTCTT CGCTCACGCC
GTGCACGATT CCGGCGCGAG GCGGACACGG CCATTTATCG CGGTGAATTG CGGCGCGATT
CCCGAATCGC TGATCGAGAG CGAACTGTTC GGCTATGCGC CCGGCGCTTT TACCGGCGCA
CGCAGCCGCG GCGCTCGCGG CAAGATCGCG CAGGCACATA CCGGCACGCT GTTTCTCGAC
GAAATCGGCG ATATGCCGCT CAATCTGCAA ACACGGCTGC TGCGCGTGCT GGCGGAAGGC
GAAGTCGTGC CGCTCGGTGG CGATGCGCCC GTGCGTGTCG ATATCGACGT GATCTGCGCC
ACGCATCGCG ATCTCGCGCA GATGGTGGCC GAAGGATCGT TCCGCGAAGA TCTCTACTAC
CGGCTGAGCG GCGCCAGCTT GCCAATGCCG CCGTTGCGCG AACGCGCGGA TATCGGCGAC
GTGATCGCGG CCGTGTTCGA AGAAGAAGCG CAAATGGCCG GCCACGTTCT CACGCTCGAC
CCGCGCCTCG CCGAACGCCT CATGGCCTTC GCATGGCCGG GCAACATTCG CCAGTTGCGC
AACGTACTGC GTTACGCCTG TGCGATGTGC GATTCCGCGC GCGTGGAATG GCGGCATATT
GCGCCCGACG TCATCGCATT GCTGGAGCCC GAAGGCGTGG GCAATCGCGC ATTGACTTCG
GCATTCGCGC GGCAGGACCC GCGCGACGAA CGCACGCGCA TCGTCGAAGC GCTGACGCGG
CATCAATGGC GGCCCAATGC CGCCGCGCAA TCATTGGGGA TCTCGCGCGC GACCTTGTAC
CGGCGTATCG CGAAGTTGGG CATTGTCGGG CCGCACCGCT GCTAG
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| Protein sequence | MPYVSQNQHI ERVRGAIEGR LPAPADSTRL VSSWQRSFEQ YRLDPGAVIG PRVLTSAELR
EVQGKEEAFL RASGQCLTRL HDMIRVADYC VMLTDAHGVT IDYRIERERR SDFKHAGLYI
GSCWSEREEG TCGVANVLTD LAPITVHKTD HFRAAFTTLT CSAAPIFAPT GEMIGVLDAS
AVRSPDNRDS QRLVFQLVRQ SAGLIEDGYF LNQTTQHWIL FGHSSRNFVE AQPEVLIAFD
ECGNLVAANR KARECIPALN GPRHIDDIFD TAHVRLHDVA RTDAIVCLRL RATGATLYAR
IRAPLKRTSR AANGTSAGAG PQSHSETQDG LHLGALGRFL KSSDARIAHN ASVALRIIGK
RLPILILGET GVGKEVFAHA VHDSGARRTR PFIAVNCGAI PESLIESELF GYAPGAFTGA
RSRGARGKIA QAHTGTLFLD EIGDMPLNLQ TRLLRVLAEG EVVPLGGDAP VRVDIDVICA
THRDLAQMVA EGSFREDLYY RLSGASLPMP PLRERADIGD VIAAVFEEEA QMAGHVLTLD
PRLAERLMAF AWPGNIRQLR NVLRYACAMC DSARVEWRHI APDVIALLEP EGVGNRALTS
AFARQDPRDE RTRIVEALTR HQWRPNAAAQ SLGISRATLY RRIAKLGIVG PHRC
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