Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0309 |
Symbol | |
ID | 4009202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 3028046 |
End bp | 3030019 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637952367 |
Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
Protein accession | YP_554987 |
Protein GI | 91779779 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATG AGGTCTGTCA CGCCGTAACG CCAATGGCGC CACGTGAGCC CGGCTGGCTC ACACCGTCGA TTCAGAAATC CCATGAACGC TCAGAGACCT TCGGCTTGAG CGCTTCAATG CGGCCGGACT ATGACGTATT GCCCGCCGCC GAACTCTCGT TGAAGCTGGA ACAAAGCCGT GTGCTGTGCG CGCATGCCAC GCCGGTGATG GAAACGCTGC ATGAGCAGAT CGTCAACACG CACAGCATGA TCGTGCTGAC CGACGCCGAA GGCCTGGTCC TTCATTCGAT CGGCGACGAT GACTTTCTGC GGCGCGCCGA GAAAGTCGCG CTGCGTCCGG GCGCCAACTG GGCCGAGGAC CGGCAAGGCA CGAACGCCAT CGGCACGGCG CTCGCAGAGC GCTGTCCGAC CGCCGTGCAT GGCGAGCAGC ACTATCTGGC GGCCAATCGC TTTCTGACCT GCTCCAGTGT GCCGATCCTC GATCCGTATG GCGATCTGAT CGGCGTGCTC GACGTCACTG GCGACTATCG CAGCTATCAC CAGCACACTA TGGCGCTGGC GAAAATGTCG GTGCAGATGA TCGAAAATCA TCTGTTTACC AACACCTTTC GCGAGACCTT GCAAATCGCC TTTCACGGCC GCCCTGAATT TCTCGGCACG CTGATGGAAG GCATCGTCGC GTTCACCTGC GACGGCCGCT TCCTGTCCGC CAATCGCAGC GCGCAATTCC AGTTGGGCAT GCCGCTCGCC GGCCTGCGCG CGCATACACT GCCGTCGTTA TTCGGGCTCA CCAGCGCGCA ACTGATCGAC CAGTTGCGCG TCAGCGAGGC CCGGCATTTA TCGCTGAACC TGCACAGTGG ATCGGTGGTC TGCGCGCACG TCGAATTCCG GCGCGCGGCG CGCACCGATG AAAGCTGGCC GTCACAGGAA CGCCGCGAAC CACGCACGGC ACACCGCGTG GAACCGCCGG CGCCGGCCGC GAGTGCGTTG TCGAAGCTCA GCTATCTCGA CACGGGCGAC CCGCAGATCG CGGCGGTCAT CGGCAAAGTC CGCAAGGTGA TCGGCAAGGA CATTCCGATT CTGATCACCG GCGAGACCGG CACCGGCAAG GAACTGCTGG CGCAGGCGAT TCACAATGAC TCCCCGCGAC GCTGCGGCGC GTTCGTCGCG GTCAATTGCG CGTCGATACC GGAAACGCTG ATCGAATCCG AGCTGTTCGG CTACGAGGAA GGCGCGTTCA CCGGCGCGCG GCGCAAAGGT GCCAGCGGCA AGCTGCTGCA AGCGAATGGC GGCACGTTAT TCCTCGACGA AATCGGCGAC ATGCCTTATC CGTTGCAGGT ACGGCTGCTG CGCGTGCTGC AGGAACGCCT TGTCAATCCG CTTGGCTCAT CGAAGTCGAT ACCGGTGGAT ATCGCCATCA TCTGCGCGAC CCACCGCGAC CTGCGTGAAA TGATTGCCCA GAACCGGTTT CGCGAGGATC TGTACTACCG CCTGAATGGC ATGGTGGTGA AACTGCCGCC GCTGCGCGAG CGCACGGATC TGTCCGCCGT CATCCACAAG ATGCTGCAAT GCGCGTCTTC CGAAAACGCT GAAGGGCAGC GCCTGAGCGT CGCCACGGAC GTAATGGCGC TGTTCGAGCA GTGCGCGTGG CCTGGCAACT TCAGGCAGCT CGGCAATCTC CTGCGCACGG CCGCCGCGAT GGTCGATGAG GACGGCGAGA TTCGCCGCGA GCACTTGCCC GATGACTTCT TCGACGGCTT GCGCACCACC GCCGCGGCGT GCGCGGGCAA CGCCGACACG CTGCCGCTGC CGAGCGGGCG TCTCGAAGAC GTCGCCGCCA GCGTCATTGC TCAAGCCGTT GCGCAGCATG GCGGCAACGT GTCGGCGGCC GCCCGCGCGC TCGGCATTTC GCGCAACACG ATCTATAGAA AGCTGCCGTC ACATGGCTTG AGCGACGCCG AAGACGCCGC CTGA
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Protein sequence | MRDEVCHAVT PMAPREPGWL TPSIQKSHER SETFGLSASM RPDYDVLPAA ELSLKLEQSR VLCAHATPVM ETLHEQIVNT HSMIVLTDAE GLVLHSIGDD DFLRRAEKVA LRPGANWAED RQGTNAIGTA LAERCPTAVH GEQHYLAANR FLTCSSVPIL DPYGDLIGVL DVTGDYRSYH QHTMALAKMS VQMIENHLFT NTFRETLQIA FHGRPEFLGT LMEGIVAFTC DGRFLSANRS AQFQLGMPLA GLRAHTLPSL FGLTSAQLID QLRVSEARHL SLNLHSGSVV CAHVEFRRAA RTDESWPSQE RREPRTAHRV EPPAPAASAL SKLSYLDTGD PQIAAVIGKV RKVIGKDIPI LITGETGTGK ELLAQAIHND SPRRCGAFVA VNCASIPETL IESELFGYEE GAFTGARRKG ASGKLLQANG GTLFLDEIGD MPYPLQVRLL RVLQERLVNP LGSSKSIPVD IAIICATHRD LREMIAQNRF REDLYYRLNG MVVKLPPLRE RTDLSAVIHK MLQCASSENA EGQRLSVATD VMALFEQCAW PGNFRQLGNL LRTAAAMVDE DGEIRREHLP DDFFDGLRTT AAACAGNADT LPLPSGRLED VAASVIAQAV AQHGGNVSAA ARALGISRNT IYRKLPSHGL SDAEDAA
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