| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0213 |
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| Symbol | |
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| ID | 4009298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 3131087 |
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| End bp | 3133069 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637952460 |
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| Product | putative glycogen debranching protein |
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| Protein accession | YP_555080 |
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| Protein GI | 91779872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA TCGAACCACC TTTCGACATC ACGCGTCTTG AAGACGAATG GCTGGAGGCG
GACGGCTTCG GCGGTTTCGC GTCGGGCACT GTCGGCACGC TGCGCACGCG CCGCTATCAC
GCGTTGCTGC TCGCCGCGAC GCGCGCGCCC GGCGGGCGCG TGGTGCTTGT CAACGGCGTG
GAGGCGTGGC TTGAAGCGAA CGGCAAGCGT TATCCATTGA GCATGCAGCG ATACGTGCCG
GACCTGATCT ATCCGGACCT GACAGCGAAT CTCATTGCGT TCGACACCGC GCCGTGGCCG
ACATGGCGTG TGCAACTCGA CACGCGTCTC GCATTGACCG CCGATGTGTT CGTCAGCAAA
GCGACCCGCG AAACGGTTTT GCGCTGGCGT CTGGAGGGCG CTGGAGATGC GGCTGCAACA
AGCGCGCTCA CATTGAAAGT CAGGCCGCTG ATATCGGGCC GCGACTACCA CGCGCTGCAT
CATGAGAACT CCGCGTTCAA CTTTACCGCA CAGACAAGCG GCGATCAGGC GTGCGTGAGC
TGGCAACCGT ACGGCGATCG GCCGGTGATC CACTGCGCGA CGAACGGCGT TTATACACAC
GCGCCGGATT GGTATCGCAA CTTCTGCTAC GTTCGCGAGC GGGAACGCGG CCTCGACTTC
AGCGAGGATC TGGCAACGCC CGGCGTGTTC AGCTTCAATC TCGCCGATGG TGAAGCGGTG
ATGATTCTCA GCGCTTCCGG CGCCGCGAGC GGCGCGCAAT CGGCCGGCGC AAAACCCGCG
CTCGCGCACG CAACAGAACT CGCGCGTATC GAGCAACAAC GCCGCAAGGC GCTCGGCTCG
CGCCTGCAAC GCTCGGCCGA TGCCTACGTG GTGGAGCGCA ACGAAGGCCG CACGATCCTC
GCGGGCTTTC CGTGGTTCAC GGACTGGGGA CGCGATACAT TCATCGCAAT GCGCGGGCTG
CTGATCGCAT CGGGCCGGCT CGACGACGCC GAAGCGATCC TGCTCGAATG GTCAGGCACG
CTCTCCGAAG GCATGCTGCC GAATCGTTTC CCCGATTATG GCGACACGCC GGAATACAAC
TCCGTCGACG CGTCGTTGTG GTTCATCGTC GCCGTGCACG ACTATCTGGC GACGCATCAT
GCGAGCGCCG CCACGCAGCA GCGCCTGCAA CAGGCAAGCG AGGCCATCCT CACGGGCTAC
ACGAAAGGCA CGCGCTTCAA CATCCAGGCA TCCGCCGACG ACGGCCTGCT CAGCGCGGGC
AGACCCGGCG TGCAACTCAC GTGGATGGAT GCAAAAGTCG GCGACTGGGT GGTCACGCCG
CGTATCGGCA AGCCGGTCGA AGTGCAGGCA CTCTGGATCA ACGCACTGCG CATTGCAGCA
GGCTGGAATC CGCACTGGCA GCCGGCCGCC GACCGGGCGT TGCAAGCGTT TCATGAACGC
TTCATCGACC CGTCCACGCA AGCGCTGTTC GACAACGTGG ACGTCGGTCA CGTCAAAGGC
GCGATAGACC GCTCGATTCG ACCCAACCAG ATCTTCGCCA TAGGCGGCCT GCCTTTTCCG
CTGCTCGACG GCGCGGCGGC GCGCGCGGTG CTAGACCAGG TCGAAGCGCA GCTGCTCACG
CCGCTGGGAC TGCGGACGCT CGCGCCTTCC GATCCTGCCT ATCGCGGGCA CTACGGCGGT
TCGCCGCTGG AGCGTGACGG CGCCTATCAT CAAGGCACCG CGTGGCCGTG GCTGCTCGGT
CCGTTTGTCG ACGCGTGGCT GCGATTCCAC GGCGGCGCGG CGGAGGCCCG CCTGCAAGCG
AAAACGCGCT TTCTCGACCC GCTCTACGCG CATCTCGATC ATGCCGGGCT CGACCATCTC
TCTGAAATCG CCGATGGCGA TGCGCCGCAC GCGCCCGCCG GCACGCCTTT CCAGGCCTGG
TCGCTGGGCG AACTGCTGCG CATGGAGATG CTGCTTGCCC GGTTACCGTC CGCCGGCGCC
TAA
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| Protein sequence | MTRIEPPFDI TRLEDEWLEA DGFGGFASGT VGTLRTRRYH ALLLAATRAP GGRVVLVNGV
EAWLEANGKR YPLSMQRYVP DLIYPDLTAN LIAFDTAPWP TWRVQLDTRL ALTADVFVSK
ATRETVLRWR LEGAGDAAAT SALTLKVRPL ISGRDYHALH HENSAFNFTA QTSGDQACVS
WQPYGDRPVI HCATNGVYTH APDWYRNFCY VRERERGLDF SEDLATPGVF SFNLADGEAV
MILSASGAAS GAQSAGAKPA LAHATELARI EQQRRKALGS RLQRSADAYV VERNEGRTIL
AGFPWFTDWG RDTFIAMRGL LIASGRLDDA EAILLEWSGT LSEGMLPNRF PDYGDTPEYN
SVDASLWFIV AVHDYLATHH ASAATQQRLQ QASEAILTGY TKGTRFNIQA SADDGLLSAG
RPGVQLTWMD AKVGDWVVTP RIGKPVEVQA LWINALRIAA GWNPHWQPAA DRALQAFHER
FIDPSTQALF DNVDVGHVKG AIDRSIRPNQ IFAIGGLPFP LLDGAAARAV LDQVEAQLLT
PLGLRTLAPS DPAYRGHYGG SPLERDGAYH QGTAWPWLLG PFVDAWLRFH GGAAEARLQA
KTRFLDPLYA HLDHAGLDHL SEIADGDAPH APAGTPFQAW SLGELLRMEM LLARLPSAGA
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