| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0179 |
|---|
| Symbol | |
|---|
| ID | 4009332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 3169749 |
|---|
| End bp | 3170633 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637952494 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_555114 |
|---|
| Protein GI | 91779906 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG ACACCATTAA CGCCGAGCGC GACGCGGACG AAGACCGCAA CGACACCACG
GGCGACACCG CCTATCGGGT GCCGGGTCTC GAACGCGGTC TGAAGATTCT CACCGAGTTC
TCGCCACGCG AGCCGGTTCT CGGCGCGCCG GAATTATCGA AGCGCCTGAA GATTCCTCGC
ACGACGGTGT TCCGTCTGCT GCAAACCCTC GAATCGCTCG GCTTTCTCGA ACGTGCCGAC
AAGGACCGCA ACTATCGCCT CGGCGTTGCC GTGCTGCGGC TCGGTTTCGA ATATCTGAGC
TCGCTCGAAC TGACCGACCT CGGCTTGCCG GTCATCGAAG CGCTGCGTAC GGAAACCGGC
CTCACCAGCC ACATCGTGAT CCGCGATGGA CGCGACGTCG TGTTCGTCGC CAAGGCGCAA
AGCCATACGC CGATTTTCAG CTCGGTGAAG GTGAACGTGG GCACGCGTCT GCCGGCTCAT
GCCACGACGC ACGGGCAGGT GCTGATGGGC GACCTGACAC TTGATGACTT GAAGAAGCTC
TATCCCGAGC CGGAACTCGA ACGCTTCACG AAGCAGACGC CCATCACCGT GGACGACCTG
TACGAACGGA TTCGCGACGA CGCGCGGCGC GGTTTCGCGA TCAGCGAGTC GTCGTTCGAA
CGCGGCATTT CCGTGGTGAG CGCGCCGGTG CGCAACGAAA CGGGACGCAT CGTCGCCGTC
ATCACGACGA CGATTCCGCG CCACGAGATC GACGCGTCGC TGCTCGACAG CGGCCTGATC
GACAAGGTCC GCCGCGCCGC CGACGATCTT TCGCAGCGGC TCAACTATCG GCCGAAGAGT
GGGCCGAATG CGGGCAGCAA ATACATGAAG GCATTGGGGC TCTGA
|
|---|
| Protein sequence | MTPDTINAER DADEDRNDTT GDTAYRVPGL ERGLKILTEF SPREPVLGAP ELSKRLKIPR
TTVFRLLQTL ESLGFLERAD KDRNYRLGVA VLRLGFEYLS SLELTDLGLP VIEALRTETG
LTSHIVIRDG RDVVFVAKAQ SHTPIFSSVK VNVGTRLPAH ATTHGQVLMG DLTLDDLKKL
YPEPELERFT KQTPITVDDL YERIRDDARR GFAISESSFE RGISVVSAPV RNETGRIVAV
ITTTIPRHEI DASLLDSGLI DKVRRAADDL SQRLNYRPKS GPNAGSKYMK ALGL
|
|---|
| |