| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0141 |
|---|
| Symbol | |
|---|
| ID | 4009370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 3218882 |
|---|
| End bp | 3221113 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637952527 |
|---|
| Product | DEAD/DEAH box helicase |
|---|
| Protein accession | YP_555147 |
|---|
| Protein GI | 91779939 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGC CAGCTTCCGC CTCGGCTGAC TCCCGAAGCT TCGACCTGCT CCACGAAAAG
ATTCGACGTT GGGTCTGGAG GGAGGGGTGG ACCGAGCTAC GCGACGCGCA GGAGCGCGCC
GTGCCCGCGC TCATCAATGC AGACCGTGAC ATCATCATCG CAGCAGCGAC AGCGGCCGGG
AAAACGGAAG CTGCGTTCCT TCCCATTCTG TCGAATTTGC TGCGCGACGA GCCGTGTACC
GGGTCGGTGC TTTATATCAG CCCGTTGAAG GCCCTTATCA ACGACCAATG GTCGCGATTG
AATGACCTTT GCGAAGAACT TGAGATTCCC GTGATTGGTT GGCACGGAGA CGTGTCAGCT
AGCCGCAAGC AGCGATTCTT TAAGAATCCA AAGGGCATTC TTCTGATAAC GCCCGAGTCT
CTCGAAGCGA TGTTTGTCAA TCGTGGTTCG TCCTTGCAGG CAACATTCGG CGCGCTGCGC
TACGTCGTTG TCGATGAATT GCATGCGTTC ATTGGGTCTG AGCGCGGAAA GCAGCTCCAG
TCACTGATGC ACCGGGTCGA GCGCACATGC GGACGGCGGG TTCCTCGCGT TGGGCTTTCT
GCCACGCTCG GCGACATGCA GCTTGCAGCG CAATTCCTTC GGCCTGGCCA CGACGCCGCC
GTCGAGGTCA TCGAATCGAA GAGCGGCGGT CAGGAACTGA AGGTCCTGAT AAAGGGCTTT
GTCCTCCGAC CGCCCAGAAT CGAACTGGAA CCCGATTTAG AAAATCCGGT GCTGGAGGAT
GCGGTCCCCG GAAGTACCGT CGACGTCGCG AACCAGCTGT ACAAGTCGCT GCGTGGCTCA
AACAATCTCA TATTTCCCAA CAGCCGGCGG CTCGTCGAAA CCTATGCCGA CCTTTTGCGC
CGCGCTTGCG AAAGAGACGG ATATCCGAAC GAATTTTGGC CTCACCATGG AAGCCTGTCG
AAGGAGCTCC GCGAGGACAC GGAGCAAGCA CTCAAGGACG GTACCAGGCC GGCAAGCGCC
ATCTGCACTA CTACGCTGGA ACTCGGTATC GACATCGGTG CAGTAAAGAG CATCGCGCAG
ATTGGCGCAC CGCCATCGGT AGCGGGCCTC CGTCAGCGTC TCGGGCGCTC AGGCCGGCGC
AAGGGCGAGC CGGCAATCTT GCGCGGGTAC TGCGTCGAAT CGGAGCTGAA GGCGGATTCC
GATTTTTCCG ACCGGATACG GGAAAGTCTA GTCCAGTCAG TCGCGATGGT AAGTCTGTTG
ATGCGAGGAT GGTTCGAGCC ACCCAGGGTT AGCGGAATGC ATGCGTCGAC TCTAATCCAG
CAAATTCTAT CCATCATCGC CGAGCGTGGT GGGTGTACGG CCGCAGAGCT TTGGGCCAGC
CTGATAACCA GTGGTACGTT CGAGGCAATA GATAAGTCAT CGTTCACGGA GGTCTTGCAG
AATCTGGGCA AGCTGGACCT TCTTGCCCAA TCGTCAAACG GTCTGCTCCT TCACGGCGGG
GTCGGTGAAA AACTGGTCAA CCACTACGAG TTTTATTCGG CTTTCGCCAG CGATGAAGAA
TTTCGGGTGA TTGCTGGTGG ACGCCAGCTT GGAAGCGTCC CAGTAGCGCA CCCGCTGACC
ACGGGTCAGG GCTTAATATT TGGCGGACGA CGCTGGCGTG TCGAAGAAGT CGACCAGGAA
GGAAAGACCA TTTACGTAAT ACCCGATAAA GGTGGCGCTC CGCCGCAATT TGATGGCAAC
GGCGCAATGG TTCATGACGA GGTGCGGCGC GAAATGCGAC GCATTCTTGG TAGTGGTGAA
CCCGTACTGT TTCTTGACGC TCGAGGACAA GAGCTCCTCC GCGAGGCGCG TCGGTACTAT
GCTGAGGCAT CGCTGGCAAG TAGCGCGATT TTCCAGGAGG GTACCGGCGT GCTTTTGGCA
ACGTGGCGTG GCGACTGGCT TAACGATGCG TTGGTCCTGC TGTTGCGGGC AAACAAACTT
GATGCACACA ACAACGGCGT AGCGATTTGT GTTGCCAATG GGAGTGTCGA CCGCGTGGTC
GATGTACTTC GTGATGTCGG TGGACTAAGC GCAGCGACTG CGATGGATGG TGTGGCTGAA
ATTGAGAATA TTGACCGCGA GAAGTGGGAT TGGGCGCTCC CGCTGTCAGT AAAGCGCAAG
GCGTTCGCAT CCACTCATCT GGACGTCGAG GGCGCCCTGT CATTTGCGCG AGGTACCGCG
CAGTGGCCGT AG
|
|---|
| Protein sequence | MNSPASASAD SRSFDLLHEK IRRWVWREGW TELRDAQERA VPALINADRD IIIAAATAAG
KTEAAFLPIL SNLLRDEPCT GSVLYISPLK ALINDQWSRL NDLCEELEIP VIGWHGDVSA
SRKQRFFKNP KGILLITPES LEAMFVNRGS SLQATFGALR YVVVDELHAF IGSERGKQLQ
SLMHRVERTC GRRVPRVGLS ATLGDMQLAA QFLRPGHDAA VEVIESKSGG QELKVLIKGF
VLRPPRIELE PDLENPVLED AVPGSTVDVA NQLYKSLRGS NNLIFPNSRR LVETYADLLR
RACERDGYPN EFWPHHGSLS KELREDTEQA LKDGTRPASA ICTTTLELGI DIGAVKSIAQ
IGAPPSVAGL RQRLGRSGRR KGEPAILRGY CVESELKADS DFSDRIRESL VQSVAMVSLL
MRGWFEPPRV SGMHASTLIQ QILSIIAERG GCTAAELWAS LITSGTFEAI DKSSFTEVLQ
NLGKLDLLAQ SSNGLLLHGG VGEKLVNHYE FYSAFASDEE FRVIAGGRQL GSVPVAHPLT
TGQGLIFGGR RWRVEEVDQE GKTIYVIPDK GGAPPQFDGN GAMVHDEVRR EMRRILGSGE
PVLFLDARGQ ELLREARRYY AEASLASSAI FQEGTGVLLA TWRGDWLNDA LVLLLRANKL
DAHNNGVAIC VANGSVDRVV DVLRDVGGLS AATAMDGVAE IENIDREKWD WALPLSVKRK
AFASTHLDVE GALSFARGTA QWP
|
|---|
| |