| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0137 |
|---|
| Symbol | |
|---|
| ID | 4009374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 3226909 |
|---|
| End bp | 3228486 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637952531 |
|---|
| Product | benzoylformate decarboxylase |
|---|
| Protein accession | YP_555151 |
|---|
| Protein GI | 91779943 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG TTCAGCATGC AGCTTATGAA ATTCTTCGCC GCCACGGCCT GACCACGATC
TTCGGCAATC CCGGCTCGAA CGAGCTGCCG TTCCTGAAGC ATTTCCCATC GGATTTTCGG
TACATCCTCG GTTTGCACGA AGGTGTCGTG ACGGGCATGG CAGACGGCTA CGCGCAGGCC
ACCGGCAACC CTGCATTCGT GAACCTGCAC TCGGCCGCGG GTACCGGCAA CGCGATGGGC
GCGCTCGCCA ACGCGTGGAA TTCGCATACG CCGCTCGTCG TGACCTCGGG CCAGCAGGTC
CGCTCGACCA TCGGGATGGA ACCGCTGCTC GCGAACGTCG ACGCCGTCAA CCTGCCGAGG
CCACTAGTGA AATGGAGCAC CGAGCCAGCC AGCGCCGAAG ACGTCCCCCG TTCCTTCGCC
CAGGCGATTC ACATCGCCCG TACACCGGCC ACCGGCCCCG TATATCTTTC GATTCCCTAC
GACGACTGGG ACCAGCCCGC ACCCGAGTAC GCGCACTATC TGGCAGCACG CGAGGTGCAG
CATGCCGGAC TGCCTTCGGA GGCGATCCTG CAGGCGCTCG CTGACCGCTT ACAGCGCGCG
ACGAACCCAG TACTGGTCCT CGGCCCGGAC GTCGACGCGC AGCACGCGAA CGAGTCGGCC
GTTGCCCTGG CCGAGCGCCT GAAGATGCCG GCCTGGATGG CACCGTCCGC ACCGCGCTGT
TCGTTCCCGA CGACCCATGC GTGCTTTCGC GGCGTGCTGC CGGCGGGCAT CGCAAGCATC
TCCCGGCTGC TCGACGGCCA CGACCTGATC CTCGTGGTCG GTGCGCCGGT GTTCCGGTAT
CACCAGTACG AACCAGGCGC ACTACTGCCG GCCGGCGCGG AGCTGGTCAG CATTACCTGC
GACGTGCTCG AAGCGGCACG CGCACCAATG GGCGATGCGA TCGTCGCCGA CATCGCACTG
ACGCTCGAAG CGCTCGCCGC GCGCGCCGAA CCAGCTGCGC GGCCGATGCC CGTTGCCGTC
GCCCGCCCTG CCGCAGCAGC AGAAACGCCG GGCCCGCTCG CACCGGAACG GGTGTTCGAC
ATCGTCGACG CAATCGCGCC GCGAGACGCC ATCTACGTGA ACGAATCGAC GTCGACCACA
AACCTGATGT GGCAGCGCCT GCGCATGACG TCGCAGGGCA GCTACTACTT CGCGGCGGCA
GGCGGTCTCG GGTTCGCGAT GCCGGCGGCG GCGGGGATCC AGCTCGCGCA GCCCGGTCGG
CGCGTGATCG GCATCATCGG CGACGGCTCC GCGAATTACG GCATCACCGC GCTGTGGACC
GCCGCGCAAT ACAGCATCCC GACCATCTTC ATCATCATGA AGAACGGCAC ATACGGCGCA
CTGCGCTGGT TCGCCGGCGT GCTGGGCGTC GAGGACGTGC CGGGGCTCTA CGTGCCAGGG
ATCGACTTCT GCGCGCTCGC CCGTGGCTAC GGCGTCGAGG CGCTGCACGC TGATTCGGGA
GCTTCCCTCA CTGTCGCGCT TGAACGGGCA TTGAGTTCCT CCAGGCCGAC GCTCATCGAG
GTCGAAACCC TGGCGTGA
|
|---|
| Protein sequence | MKTVQHAAYE ILRRHGLTTI FGNPGSNELP FLKHFPSDFR YILGLHEGVV TGMADGYAQA
TGNPAFVNLH SAAGTGNAMG ALANAWNSHT PLVVTSGQQV RSTIGMEPLL ANVDAVNLPR
PLVKWSTEPA SAEDVPRSFA QAIHIARTPA TGPVYLSIPY DDWDQPAPEY AHYLAAREVQ
HAGLPSEAIL QALADRLQRA TNPVLVLGPD VDAQHANESA VALAERLKMP AWMAPSAPRC
SFPTTHACFR GVLPAGIASI SRLLDGHDLI LVVGAPVFRY HQYEPGALLP AGAELVSITC
DVLEAARAPM GDAIVADIAL TLEALAARAE PAARPMPVAV ARPAAAAETP GPLAPERVFD
IVDAIAPRDA IYVNESTSTT NLMWQRLRMT SQGSYYFAAA GGLGFAMPAA AGIQLAQPGR
RVIGIIGDGS ANYGITALWT AAQYSIPTIF IIMKNGTYGA LRWFAGVLGV EDVPGLYVPG
IDFCALARGY GVEALHADSG ASLTVALERA LSSSRPTLIE VETLA
|
|---|
| |