Gene Bxe_B0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0054 
Symbol 
ID4009457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3305582 
End bp3306793 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content62% 
IMG OID637952603 
Productmajor facilitator transporter 
Protein accessionYP_555223 
Protein GI91780015 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG AGATGCCTTC ACCTTCACCC ACCAGACCAT CTATCCCACG TACGGTCTGG 
GCGCTTGGCT TCGTGAGCCT GTTCATGGAC CTGTCGTCGG AACTGGTGCA TGCACTGCTG
CCCGTGTTCC TCGTGACCAC AATGGCCATG AGCGTGACCG CACTCGGCTT GCTTGAAGGC
ATTGCCGAAG CAACGGCTCT CATCGTAAAG GTATTTTCCG GCCCGCTCAG CGATTCGCTC
GGCCGGCGAA AGGGCCTGTT GTTACTCGGC TATGGATTGG CGGCTCTGAC GAAGCCGCTG
TTCCCGCTCG CGACCTCACC CGGCGGGGTC ATCACGGCCC GGTTGCTCGA TCGTGTCGGC
AAGGGCATTC GAGGCGCTCC ACGCGATGCG CTGGTCGCCG ACGTGGCGCC GCCGGAGATC
CGCGGCGCGT GTTTTGGATT GCGTCAGTCG ATGGATACGA TCGGAGCTTT CCTCGGTCCC
GCACTCGCCA TTGCGCTGAT GTTCTGGCTC ACCGACCACA TTCGTACCGT GCTGTGGTGC
GCCGTCGCTC CTGCCTTCAT CGCAATTGGT CTCATCGCGT TTGGCATCGA TGAATCGGGC
CATGCGACGG CACGGCGTGC CTTCCGCTCT CCATTGCGGT GGAGCGTGCT GCACGAGTTC
CCGGCCCGCT ACTGGGTCGT TCTCGTCATC GGCGCGACCT TCACGCTCGC GCGCTTTAGC
GAAGCATTCC TTGTCTTGCG TGCACAGCAA ACGGGTCTTG AACTCGCGTG GATTCCCGGC
GTGATGGTCG TGATGAGTCT GGCGTATTCG TTGTCGGCGT ACCCGGTCGG CGTGCTGTCG
GACCGACTGG ATCGAAGGCT TCTGCTCGCG CTCGGCATGG TGCTGTTGAT TGCGGCCGAC
CTGCTGCTAG GTATGGGGCA CTCGGTCGTA TCGGTATTCG TCGGCATCGC AATATGGGGG
CTGCACATGG GTTTCACGCA GGGTATCCTC GCCGCAATGG TGTCCGAGAC TGCGCCCTCG
ACGCTGCGAG GTACGGCCTT TGGCGCGTTT AACTTGGCCT GCGGTGTGTG TGTGTTGCTC
GCTAGCGCGC TGGCCGGCTG GCTGTGGGAC CGCTTCGGCG CTCCGACAAC CTTTCTTACC
GGTGCAGCAA TCGTCCTGGT ACCACTACTG CTGTGCGGTC TTGCGCCGCG GCCAGCAATA
CACCGTGCCT GA
 
Protein sequence
MTPEMPSPSP TRPSIPRTVW ALGFVSLFMD LSSELVHALL PVFLVTTMAM SVTALGLLEG 
IAEATALIVK VFSGPLSDSL GRRKGLLLLG YGLAALTKPL FPLATSPGGV ITARLLDRVG
KGIRGAPRDA LVADVAPPEI RGACFGLRQS MDTIGAFLGP ALAIALMFWL TDHIRTVLWC
AVAPAFIAIG LIAFGIDESG HATARRAFRS PLRWSVLHEF PARYWVVLVI GATFTLARFS
EAFLVLRAQQ TGLELAWIPG VMVVMSLAYS LSAYPVGVLS DRLDRRLLLA LGMVLLIAAD
LLLGMGHSVV SVFVGIAIWG LHMGFTQGIL AAMVSETAPS TLRGTAFGAF NLACGVCVLL
ASALAGWLWD RFGAPTTFLT GAAIVLVPLL LCGLAPRPAI HRA