Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0054 |
Symbol | |
ID | 4009457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 3305582 |
End bp | 3306793 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637952603 |
Product | major facilitator transporter |
Protein accession | YP_555223 |
Protein GI | 91780015 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCGG AGATGCCTTC ACCTTCACCC ACCAGACCAT CTATCCCACG TACGGTCTGG GCGCTTGGCT TCGTGAGCCT GTTCATGGAC CTGTCGTCGG AACTGGTGCA TGCACTGCTG CCCGTGTTCC TCGTGACCAC AATGGCCATG AGCGTGACCG CACTCGGCTT GCTTGAAGGC ATTGCCGAAG CAACGGCTCT CATCGTAAAG GTATTTTCCG GCCCGCTCAG CGATTCGCTC GGCCGGCGAA AGGGCCTGTT GTTACTCGGC TATGGATTGG CGGCTCTGAC GAAGCCGCTG TTCCCGCTCG CGACCTCACC CGGCGGGGTC ATCACGGCCC GGTTGCTCGA TCGTGTCGGC AAGGGCATTC GAGGCGCTCC ACGCGATGCG CTGGTCGCCG ACGTGGCGCC GCCGGAGATC CGCGGCGCGT GTTTTGGATT GCGTCAGTCG ATGGATACGA TCGGAGCTTT CCTCGGTCCC GCACTCGCCA TTGCGCTGAT GTTCTGGCTC ACCGACCACA TTCGTACCGT GCTGTGGTGC GCCGTCGCTC CTGCCTTCAT CGCAATTGGT CTCATCGCGT TTGGCATCGA TGAATCGGGC CATGCGACGG CACGGCGTGC CTTCCGCTCT CCATTGCGGT GGAGCGTGCT GCACGAGTTC CCGGCCCGCT ACTGGGTCGT TCTCGTCATC GGCGCGACCT TCACGCTCGC GCGCTTTAGC GAAGCATTCC TTGTCTTGCG TGCACAGCAA ACGGGTCTTG AACTCGCGTG GATTCCCGGC GTGATGGTCG TGATGAGTCT GGCGTATTCG TTGTCGGCGT ACCCGGTCGG CGTGCTGTCG GACCGACTGG ATCGAAGGCT TCTGCTCGCG CTCGGCATGG TGCTGTTGAT TGCGGCCGAC CTGCTGCTAG GTATGGGGCA CTCGGTCGTA TCGGTATTCG TCGGCATCGC AATATGGGGG CTGCACATGG GTTTCACGCA GGGTATCCTC GCCGCAATGG TGTCCGAGAC TGCGCCCTCG ACGCTGCGAG GTACGGCCTT TGGCGCGTTT AACTTGGCCT GCGGTGTGTG TGTGTTGCTC GCTAGCGCGC TGGCCGGCTG GCTGTGGGAC CGCTTCGGCG CTCCGACAAC CTTTCTTACC GGTGCAGCAA TCGTCCTGGT ACCACTACTG CTGTGCGGTC TTGCGCCGCG GCCAGCAATA CACCGTGCCT GA
|
Protein sequence | MTPEMPSPSP TRPSIPRTVW ALGFVSLFMD LSSELVHALL PVFLVTTMAM SVTALGLLEG IAEATALIVK VFSGPLSDSL GRRKGLLLLG YGLAALTKPL FPLATSPGGV ITARLLDRVG KGIRGAPRDA LVADVAPPEI RGACFGLRQS MDTIGAFLGP ALAIALMFWL TDHIRTVLWC AVAPAFIAIG LIAFGIDESG HATARRAFRS PLRWSVLHEF PARYWVVLVI GATFTLARFS EAFLVLRAQQ TGLELAWIPG VMVVMSLAYS LSAYPVGVLS DRLDRRLLLA LGMVLLIAAD LLLGMGHSVV SVFVGIAIWG LHMGFTQGIL AAMVSETAPS TLRGTAFGAF NLACGVCVLL ASALAGWLWD RFGAPTTFLT GAAIVLVPLL LCGLAPRPAI HRA
|
| |