| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0014 |
|---|
| Symbol | |
|---|
| ID | 4009497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 3344104 |
|---|
| End bp | 3345120 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637952640 |
|---|
| Product | putative VacJ-like lipoprotein |
|---|
| Protein accession | YP_555260 |
|---|
| Protein GI | 91780052 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC GTAACACCGC GCTGGCACTC GTCGCCACCG GTTTGATTTC TGGCTGTGCC
ACCGGCCCCG ACCGCAAACC GGGCGACCCG TTCGAACCGA TGAACCGGGC GGTGTTCAGT
TTTAACGATG GGTTGGACCG CTATATCGCC GTTCCGGCGG CGAAGGGTTA TCAGAAAGTA
ACGCCGCAGC CGTTGCGCAC AGCAGTGAGC AACTTCTTCT CGAATCTGGG TGATCTGTCG
AACGCGGCCA ACGCGCTCTT GCAGTTGAAG ATCACCGACG CGACCGAGGA CATCGTCCGT
TTCGCGTTCA ACTCGACCTT CGGTCTGGGC GGCCTGCTCG ATTGGGCGAC ACCCGCCGGG
CTGCCCAAGC ATCATCAGGA TTTCGGCCTG ACCCTGGGCC ATTGGGGCAT TCCGTCGGGC
CCATATCTGG TCCTGCCGCT GTTCGGCCCG AGCACGGTGC GTGACAGCAT GGGGCTTATC
GTCGACGTGA AGTTCAACCC GCTGAACTAC ATGGAGCCGG CGGTGCGCAA TCCGCTTTAC
GTGCTCCAGT TCGTCAGCGT GCGTTCCGAC CTGCTGGGCG CGTCGGACCT GCTGCAACAG
GCCGCCCTGG ACAAGTACTC GTTCGTGCGC GACGCCTATA CGCAGCAACG CCGCGCGCGT
CTGCGCGGCA CGGGCGACAA TGCGGCGCCG CTGCCGAACT ACGACGATCA GGGTGATTCC
GGCGCTTCGT CGGTGCCGGC AGCAGGCGCG CCGGCGGCAG GTGCTCTGCC GAATTACGCC
GATCCGGGCG ACGCCGCGGA AGCGCCGAAC GCGGCTTCCG GCGCGGCTAC AGGTGCGCCG
GCGGGCGTGC CCGACTACAC CGATCCGGGT GATACGCCGG CGAGCGGTGC AGCGGGCTCG
ACGCCGGTTG CGCCGGCTGA AGCGCCGGCC GGCGCTTCAG AAACACCCGC CCCCACACTG
CCCGCTGCGC CACCGGCCGA CACGACACGG CCGGCTTCGG CACCGGCAAC GCAGTAG
|
|---|
| Protein sequence | MKLRNTALAL VATGLISGCA TGPDRKPGDP FEPMNRAVFS FNDGLDRYIA VPAAKGYQKV
TPQPLRTAVS NFFSNLGDLS NAANALLQLK ITDATEDIVR FAFNSTFGLG GLLDWATPAG
LPKHHQDFGL TLGHWGIPSG PYLVLPLFGP STVRDSMGLI VDVKFNPLNY MEPAVRNPLY
VLQFVSVRSD LLGASDLLQQ AALDKYSFVR DAYTQQRRAR LRGTGDNAAP LPNYDDQGDS
GASSVPAAGA PAAGALPNYA DPGDAAEAPN AASGAATGAP AGVPDYTDPG DTPASGAAGS
TPVAPAEAPA GASETPAPTL PAAPPADTTR PASAPATQ
|
|---|
| |