Gene Bxe_B0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0013 
Symbol 
ID4009498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp3345223 
End bp3345954 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID637952641 
Producthypothetical protein 
Protein accessionYP_555261 
Protein GI91780053 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR03468] hopanoid-associated phosphorylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.520406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTTC CGAGCACTCC GTCAACGGAT GGCGGCCGTA GCCGCTTGCC GGTCATCATG 
GTGACCGGCA TGGCGTTCGA AGCGCGAATC GCGCGTGGCG AAGGTGTCGA GGTCGTCTAC
GCGGCGCGCG CCGATCTGCT CGAACAGGCA TTGAGCGCGG CGGTCGCGCG TGGCTGTTCG
GGCATCATGA GCTTCGGTAC GGCGGGCGGT TTGGCGCCGG ATCTGCAGCC GGGTTCGGTG
ATCGTCGCGG ACGCGGTCGA GGGGCCGTTT GGGCGCTTGC CGACCGACCG GCGATGGGCG
GACAGGCTTG CGGCTGCGCT GGCGGTCGGG CCGCTCTCCG GGCGTGTGCG GCGCGGGCTC
ATGGCGGCCG TCACGGCGCC GTTGGTGAGC GCGGGCGACA AGGACGTTCT GCATCGCTCG
AACGGCGCGC TGGCGGTGGA TATGGAGTCG CATATTGCCG GCGCGAAGGC TGCCGCGCAT
GGGGTGCCGT TCGCGGTGTG CCGCGCGATC GTCGATCCGG CGTGGCGCAC GTTGCCGTCC
GCCGCCACGG CGGGCCTGCG CGATGATGGA AGTACGGCGC TTGCGCCGAT TCTGCGGGAA
TTGTTGCGAC AGCCGTTGCA ACTCGGCGCA CTGATTCAGG TTGCCATCGA CGCCCGGGCG
GCGCGCATCT CGCTAGTCGA GGCGCGGCGC GCAATGGGCG AGGCCGGGGC GTTGCAGATG
GCGAGCGTCT GA
 
Protein sequence
MPLPSTPSTD GGRSRLPVIM VTGMAFEARI ARGEGVEVVY AARADLLEQA LSAAVARGCS 
GIMSFGTAGG LAPDLQPGSV IVADAVEGPF GRLPTDRRWA DRLAAALAVG PLSGRVRRGL
MAAVTAPLVS AGDKDVLHRS NGALAVDMES HIAGAKAAAH GVPFAVCRAI VDPAWRTLPS
AATAGLRDDG STALAPILRE LLRQPLQLGA LIQVAIDARA ARISLVEARR AMGEAGALQM
ASV