| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0012 |
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| Symbol | |
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| ID | 4009499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 3345958 |
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| End bp | 3347994 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637952642 |
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| Product | Terpene synthase |
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| Protein accession | YP_555262 |
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| Protein GI | 91780054 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.131219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.786968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT TATCCCAAAC CCAGCCGCGG GACGCCGTCC TGCCCGAAGC CGCCGGCGCG
GTGCCGCCCG CATCCGCGCC CGCGCCGGCT GCCGCGAGCG AAGCTCCCGC AGCATCGCTC
GACACCGCCA TCACACGCGC CACCGATGCG ATCCTCGCCG CGCAAAAGCC GGACGGCCAC
TGGGTCTACG AACTCGAAGC CGACGCGACG ATTCCCGCCG AATACGTGCT GCTGGTCCAC
TATCTCGGCG AAACGCCGAA CGTGGAACTG GAGCAGAAGA TCGCGCGCTA TCTGCGCCGC
ATCCAGTTGC CCGACGGCGG CTGGCCGCTC TTTACCGATG GCGCGCCCGA CGTCAGCGCC
AGCGTCAAGG CGTACTTCGC GCTGAAGATG ATCGGCGACC CGGCGGACGC GGAGCACATG
GTCCGCGCAC GCGAGGCGAT TCTCGCCAAC GGCGGCGCCG AAGCCGTGAA TGTGTTCACG
CGGATTCTGC TCGCGCTGTT CGGCGTGGTG TCATGGCGCG CGGTGCCCAT GATGCCCGTC
GAGATCATGT TGTTGCCCAT GTGGTTCCCG TTCCATCTCT CGAAGGTGTC CTACTGGGCG
CGTACCGTGA TCGTGCCGCT GCTGGTGCTC AATGCGAAGC GGCCGCTGGC GCGCAACCCG
CGCCGCGTGC GGATAGACGA GCTGTTCCGC GGTGCGCCGG TCAACACCGG CCCGCGCGAC
CGGGCGCCGC ATCAGCATGC CGGGTGGTTC CGGTTTTTCA GTGGCGTGGA CATGCTGCTG
CGCGCGGTGG ACGGCCTGTT CCCGAAAGCC ACGCGAGAGC GCGCGGTGCG CGCGGCGGTG
GCCTTCGTCG ATGAACGGCT GAACGGCGAA GACGGGCTCG GCGCGATTTT CCCGGCGATG
GCGAACTCGG TGATGATGTA CGACGTGCTC GGCTATCCGG CCGATCACCC GAATCGCGCA
ATAGCTCGCC AGTCGATCGA AAAGCTGCTC GTTATCAAGG ATGACGAAGC ATATTGCCAG
CCGTGTCTGT CGCCGGTCTG GGACACCTCG CTCGTCGCGC ATGCGCTGCT CGAAACCGGC
GAGGCTCGTG CCGAGCAGGC CGCCGAACGT GGGCTCGCGT GGCTGCGTCC GCTGCAGATT
CTCGACGTGC GCGGCGACTG GATTTCGCGC CGTCCGAATG TGCGGCCGGG CGGTTGGGCA
TTCCAGTACA ACAACGACTA CTACCCGGAC GTCGATGACA CGGCGGTGGT GGTCATGGCC
ATGCATCGCT CGGCGGCGCT CACGCATTCC GAGGTCGATC GCGAAGCCAT AGCGCGGGCG
CGCGAATGGG TGGTCGGCAT GCAGAGCAGC GACGGCGGCT GGGGTGCGTT CGAGCCGGAA
AACACGCAGT ACTACCTGAA CAACATTCCG TTCTCCGACC ACGGCGCCTT GCTCGATCCG
CCGACCGCGG ACGTCTCCGG CCGCTGTCTG TCGATGCTCG CGCAACTCGG CGAACTGCCG
CAGGGCAGCG AGCCGGCGCA ACGCGCGTTC GCGTACATGC TGAAGGAACA GGAGCCGGAC
GGCAGCTGGT ATGGCCGCTG GGGTCTGAAC TACATCTACG GGACGTGGAC GGCGCTGTGT
TCGCTGAACG CAGCCGGCAT GCCGCACGAC GACCCGCGCA TGAAGCGCGC CGCGAAGTGG
CTTCTGTCGA TCCAGAACGA AGACGGCGGG TGGGGCGAGG GCGGCGAGAG CTACAAGCTC
GACTACCACG GCTATGAACG CGCGCCGAGC ACGGCTTCGC AAACGGCGTG GGCGCTGATG
GGCCTGATGG CGGCGGGCGA GGTCAATCAC GAAGCGGTGG CGCGCGGCGT CGCGTATTTG
CAGCGGGAAC AGCGCGAGCA TGGCCTGTGG GACGAAACGC GTTTCACCGC CACCGGCTTC
CCGCGCGTCT TCTATCTGCG CTACCACGGC TATCGCAAGT TCTTCCCGCT GTGGGCCCTG
GCGCGCTTCC GCCATCTGAA GCGTCATGGC CTGACGCGCG TCGCGGTCGG GATGTAA
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| Protein sequence | MNDLSQTQPR DAVLPEAAGA VPPASAPAPA AASEAPAASL DTAITRATDA ILAAQKPDGH
WVYELEADAT IPAEYVLLVH YLGETPNVEL EQKIARYLRR IQLPDGGWPL FTDGAPDVSA
SVKAYFALKM IGDPADAEHM VRAREAILAN GGAEAVNVFT RILLALFGVV SWRAVPMMPV
EIMLLPMWFP FHLSKVSYWA RTVIVPLLVL NAKRPLARNP RRVRIDELFR GAPVNTGPRD
RAPHQHAGWF RFFSGVDMLL RAVDGLFPKA TRERAVRAAV AFVDERLNGE DGLGAIFPAM
ANSVMMYDVL GYPADHPNRA IARQSIEKLL VIKDDEAYCQ PCLSPVWDTS LVAHALLETG
EARAEQAAER GLAWLRPLQI LDVRGDWISR RPNVRPGGWA FQYNNDYYPD VDDTAVVVMA
MHRSAALTHS EVDREAIARA REWVVGMQSS DGGWGAFEPE NTQYYLNNIP FSDHGALLDP
PTADVSGRCL SMLAQLGELP QGSEPAQRAF AYMLKEQEPD GSWYGRWGLN YIYGTWTALC
SLNAAGMPHD DPRMKRAAKW LLSIQNEDGG WGEGGESYKL DYHGYERAPS TASQTAWALM
GLMAAGEVNH EAVARGVAYL QREQREHGLW DETRFTATGF PRVFYLRYHG YRKFFPLWAL
ARFRHLKRHG LTRVAVGM
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