Gene Bxe_A4523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4523 
Symbol 
ID4004678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp2017064 
End bp2018236 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID637946985 
ProductOmpC family outer membrane porin 
Protein accessionYP_558375 
Protein GI91783169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000520547 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AATCGACCAT TGGAGCCCTC CTGCTCGGAG GATTTTCAAC TATCGCTCAT 
GCACAGAGCA GCGTGACACT GTACGGCAAT GTTGATACCG GAATAGCGTA CACATCCAAC
GTCCAAGGAA AGTCACTCTG GCAGGAGACG CAAGGTATCG GGCTCGGGAA TCGCTGGGGG
CTGCTCGGAC AAGGTGACTT GGGCAACGGC CTGAAAGCCA TTTTTAGGCT GGAGAACGGT
TACAGTTCTT CTAGTGGTGC GCTGTTAAAC GGCGGGCGCT TATTTGGTCG CCAGGCATAT
GTTGGCTTGA GCCAGCAGCA ATTCGGTGCA GTGACATTCG GTCGGCAATA TGACTCAGTC
GTGGACTATG TAAGTCTCCT CGCCTCCTCG AAGCAGTATG CTGATCAAAT GGGAGCCCAC
ATCGGTGACA ACGACAACAT GTTCAACTCC CTTCGAATCA ACAATTCGGT CAAGTATGCA
AGTTCGCAGA TTGCCGGGCT ATCGTTTGGC GGTCTCTATG CATTCAGCAA TCAAGCGTCT
GGTGGAAATT CAACCGGCTT CTCAAACGAC AGTGCCTTCA GCGTAGGCGC AGCCTATACA
AATGGCCCGC TCAAGATAGC GGCTGCATTT TTGCAATTGA ACCACCCATC GTCGGGCAAT
GCCAATGGCA GCAACACGGG CGGAGCTATT TCGGGCGACT ATAACACTCT CAGTACCAAC
ATCTTTTATT CGCAACCCGT TGCGAAGCAA ACCGTGGGAG CGGCCGGAGC CAACTACAAG
ATCTCGGGAT TCACTATCGG AGCTGTCTTC AGCGACGTAG TTTTTGACTA CAACGATGGC
ACTTCTCTTC GATTGCTAAA TTACGAGGCG AACGTCAGCT ATCAGATCAC GCAAGCGATT
GCAACTCAGC TCGTCTACAC CTTCACCGAT GGAACGGCGG ATGGGGGTGC GAGTTACGGA
AATTTCGCAG ATGGGCGACA CCCGCGCTGG CAGCAAGTTA CGGCTGGCGC CAGTTACTCA
TTATCGAAAG CAACTTCGCT CTATGTCTTG GCAGCCTACC AACTTGCATG CGGGGACGCC
CAGCGTGCTG CCATATCCCC ATCGGGCGGA GAAACGGCTT GGGGTCATAG GTCACAGATC
GAGCTTACAA CAGGAATTAC CGTCAAGTTC TAG
 
Protein sequence
MMKKSTIGAL LLGGFSTIAH AQSSVTLYGN VDTGIAYTSN VQGKSLWQET QGIGLGNRWG 
LLGQGDLGNG LKAIFRLENG YSSSSGALLN GGRLFGRQAY VGLSQQQFGA VTFGRQYDSV
VDYVSLLASS KQYADQMGAH IGDNDNMFNS LRINNSVKYA SSQIAGLSFG GLYAFSNQAS
GGNSTGFSND SAFSVGAAYT NGPLKIAAAF LQLNHPSSGN ANGSNTGGAI SGDYNTLSTN
IFYSQPVAKQ TVGAAGANYK ISGFTIGAVF SDVVFDYNDG TSLRLLNYEA NVSYQITQAI
ATQLVYTFTD GTADGGASYG NFADGRHPRW QQVTAGASYS LSKATSLYVL AAYQLACGDA
QRAAISPSGG ETAWGHRSQI ELTTGITVKF