Gene Bxe_A4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4487 
Symbol 
ID4006445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4868273 
End bp4868815 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID637949659 
ProductMarR family transcriptional regulator 
Protein accessionYP_560997 
Protein GI91785791 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000975501 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000429514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACG GTCCCTACAA GGCGGACGAG ATTCACCTCG AATCGAGTCT TGGCTACTAC 
CTGACGAAAG CTCGAAATGT GCTGGTCGAG CGGACAGACC GTGCCGTCAA GCCGCTCGGG
CTGACCACGC AGCAGATCGG CGTGATCCTT ATGCTGTCGT CGCGGCGTGC GAGTACGCCG
TTCGAACTGT CGCGCGCCAT GTCGTATGAC AGCGGGTCGA TGACGCGTCT GCTCGATCGC
CTTGAAAAGA AAGGCTTTGT CGTGCGCACG CGCAGCGAGA CCGATCGGCG GATGGTGAAA
CTGGAGTTGA CGCCGCAAGG CCACGAAGCC GCACGCCAAC TGCCCGGTCT GGGCGCGGCG
GTACTGAACG AGCAGTTGCG GGGGTTTTCC GCCGCCGACC ACGCCACCTT GATCGACCTG
CTCGGCCGTT TCATTGCGAA CGGCATCGAC GCGGGAGCAA GCGCCGGGTG TGGCTTGGGG
CCGCAACAGG AATCGCAGGA CGAATCACCC GAAGACTCGC CGCCGGAACA CGGCGAACGC
TAA
 
Protein sequence
MTDGPYKADE IHLESSLGYY LTKARNVLVE RTDRAVKPLG LTTQQIGVIL MLSSRRASTP 
FELSRAMSYD SGSMTRLLDR LEKKGFVVRT RSETDRRMVK LELTPQGHEA ARQLPGLGAA
VLNEQLRGFS AADHATLIDL LGRFIANGID AGASAGCGLG PQQESQDESP EDSPPEHGER