| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4469 |
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| Symbol | trmE |
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| ID | 4006463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4889839 |
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| End bp | 4891233 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637949676 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_561014 |
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| Protein GI | 91785808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0533201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCA CCGATTCCGA TCCCATCGTC GCCATCGCCA CCGCGCCCGG CCGGGGAGGT
ATCGGCGTGG TGCGGATTTC GTTCGGCCGA GCGGGTGAGG CGGCGGCCCA GCCGCTGATG
CAAGCGCTCA CCGGTCAGAC ACTCGCCGCC CGCCGCGCCA GCTACGTTCC GTTCCTCGAC
GCCAGCGGCG ATGCGCTCGA CCGTGGCATC GCGCTGTACT TCCCGGCGCC ACACTCCTAT
ACGGGCGAAC ACGTGCTCGA ACTGCAGGGC CACGGCGGTC CGGTCGTGCT GCAACTCGTG
CTGCAGCGTT GCATCGACGC CGGCCGCGCC TTCGGTCTAC GTCTGGCCGA ACCGGGCGAG
TTCACGCGCC GCGCCTTCCT CAACGACAAG CTGGATCTGG CGCAAGCCGA AGCGGTCGCC
GATCTGATCG AGGCCAGCAC CGAGGCCGCC GCGCGCTCGG CGGGCCGCTC GCTCGACGGC
GCATTTTCGC GCGACATTCA CGCGTTGGTC GAAGACGTGA TCACGCTGCG CATGCTCGTC
GAAGCGACGC TCGACTTTCC CGAGGAGGAG ATCGACTTCC TCGAAGCCGC CGACGCCCGC
GGCAAGCTCG CGCGGATTCG CGAGCGCCTC GGGCACGTGC TGAGCGAGGC GCGGCAAGGC
GCGTTGTTGC GCGAGGGCCT CTCGGTGGTG CTGGCCGGGC AGCCCAACGT CGGCAAATCG
TCGCTGCTGA ATGCGCTGGC GGGCGCGGAA CTGGCGATCG TCACGCCGAT CGCCGGCACC
ACGCGGGACA AGGTCGCGCA GACGATCCAG ATCGAAGGCA TTCCGCTACA CGTGATCGAT
ACCGCCGGCC TGCGCGATAC CGAGGACGAA GTCGAAAAAA TCGGCATTGC GCGCACCTGG
AACGAGATCG AACGCGCGGA TGTCGTACTG CATCTGCTCG ATGCGCGCAC CGGCATGACG
GTCGAAGACG AGGCGATCGC CGGGCGCTTT CCGGCCGGCG TGCCGGTGGT GCGCGTGCTG
AACAAGACGG ACCTGACCGG CCTTGCGCCG GCAACGCGAG CACTCGACGC AGACCTGGAT
CTGAGCGAAG TGCGGCTCTC GGCGAAACAG GGCGACGGCG TAGCGCTGTT GCGCGAAGAG
TTGCTGCGGA TCGCCGGCTG GCAAGCAGGC GCGGAAAGCG TGTACCTGGC GCGCGAACGG
CATCTGATTG CACTACGCGC CGCCGAAGAA CATCTCGCCA CCGCAGCCGC GCACGCCGAT
CAGAACTCCC AGGCGCTGGA CCTATTCGCT GAAGAGCTTC GGCTCGCGCA GGACCAGCTG
AATTCCATCA CGGGCGAATT CAGTTCGGAT GACCTGCTCG GAGTGATTTT CAGCAGGTTC
TGTATCGGCA AGTGA
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| Protein sequence | MLTTDSDPIV AIATAPGRGG IGVVRISFGR AGEAAAQPLM QALTGQTLAA RRASYVPFLD
ASGDALDRGI ALYFPAPHSY TGEHVLELQG HGGPVVLQLV LQRCIDAGRA FGLRLAEPGE
FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLDG AFSRDIHALV EDVITLRMLV
EATLDFPEEE IDFLEAADAR GKLARIRERL GHVLSEARQG ALLREGLSVV LAGQPNVGKS
SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ IEGIPLHVID TAGLRDTEDE VEKIGIARTW
NEIERADVVL HLLDARTGMT VEDEAIAGRF PAGVPVVRVL NKTDLTGLAP ATRALDADLD
LSEVRLSAKQ GDGVALLREE LLRIAGWQAG AESVYLARER HLIALRAAEE HLATAAAHAD
QNSQALDLFA EELRLAQDQL NSITGEFSSD DLLGVIFSRF CIGK
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