| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4466 |
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| Symbol | |
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| ID | 4006466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4892963 |
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| End bp | 4894621 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637949679 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_561017 |
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| Protein GI | 91785811 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.111062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTC ATCTTTTTCA TGTCAGCGGT CATGCTGTTC
GACAACTGGC AACGCGACCA CGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCCGACC
AGGACCGTCG GTAGCGCCGC ACCGGGAACC ACGACGCCGG GAACCCAGCC CGCCGATCTG
CCGGCCACGA ACGCAGCCGC ACCGGGCAAC GCGCCGGCGG CCACGCAATC GCAACTGATC
AAGTTCAACA CCGACGTCTA TAGCGGCGAA ATCGACACTC GCGGCGGCAC GCTGTCGAAG
CTGTCGCTCG TCAAGCAAGG CGACGGCAAG CAGCCCGACC TCGTCATCAC GCTGTTCGAC
CGCACCGCGA ACCACACGTA CCTGGCGCGC ACGGGCCTGC TCGGCGGCGA CTTCCCGAAT
CACAACGACA TCTACACGCC GTTGCCGAAC CAGCCGCACG ATCTGACGGG CGACGAAAAG
TCGTTCCAGA TCAGCTTCGA GTCGCCGGTG AAGGGTGGCG TGAAGGTCAT CAAGACCTAC
ACGTTCACGC GTGGCAGCTA TGTGATCGGC GTCGACACGA AGATCCAGAA CGTCGGCACC
ACGCCGGTGA GCCCGTCGGT CTATATGGAA CTGGTACGTG ACGATCAGCC GGTGGAAACG
CCGCGCTTCT CGCACACGTT CATCGGGCCG GCTGTCTACA CTGACCAGCA TCACTTCCAG
AAGATGACGT TCGGCGACAT CGACAAGAAC AAGCAGGACT ACGCGACTTC GGCCGACAAC
GGCTGGATTG CGATGGTCCA GCATTACTTC GCGTCGGCCT GGATTCCGCA GCAAGGTGCG
AAGCGCGATA TTTACGTCGA GAAGATCGAT CCGGCGCTGT ATCGCGTCGG CGTGAAGGAG
CCGGTGCCGA CCATCGCGCC GGGCCAAACC GTCGACGTAT CCGCGCGTCT GTTCGCGGGT
CCGGAAGAAG AGCGCATGCT CGAAGGCATC GCGCCGGGTC TGGAACTGGT GAAGGACTAC
GGCTGGGTGA CGATCATCGC GAAGCCGCTG TTCTGGCTGC TCGAGAAGAT CCACAGCTAT
GTCGGCAACT GGGGCTGGTC GATCGTGCTG CTCACGCTGC TGATCAAGGC CGTGTTCTTC
CCGCTGTCCG CTGCGAGCTA CAAGTCGATG GCGCGCATGA AGGCGATCAC GCCGCGCATG
CAGGCGCTGC GCGAACGCTT CAAGGGCGAT CCGCAGAAGA TGAACTCGGC GCTGATGGAG
CTGTACAAGA CCGAAAAGGT CAATCCGTTC GGCGGCTGTC TGCCGGTCGT GATCCAGATT
CCGGTGTTCA TTTCGCTGTA CTGGGTGCTG CTGTCGTCGG TGGAAATGCG CGGCGCGCCG
TGGATCCTGT GGATTCACGA TCTGTCGCAA CAGGATCCGT TCTTCATCCT GCCGGTGCTG
ATGGCCGTTT CCATGTTCCT GCAGACCAAA CTGAACCCGA CGCCGCCGGA CCCGGTTCAA
GCCAAGATGA TGATGTTCAT GCCGATCGCG TTCTCGGTCA TGTTCTTCTT CTTCCCGGCC
GGCCTGGTGC TGTACTACGT CGTGAACAAC GTGCTCTCGA TCGCCCAGCA GTACTACATC
ACGCGGATGA TGGGGCAGGC GAAAACCAAA GCGGCCTGA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLF DNWQRDHGRP SMFFPSATPT RTVGSAAPGT TTPGTQPADL
PATNAAAPGN APAATQSQLI KFNTDVYSGE IDTRGGTLSK LSLVKQGDGK QPDLVITLFD
RTANHTYLAR TGLLGGDFPN HNDIYTPLPN QPHDLTGDEK SFQISFESPV KGGVKVIKTY
TFTRGSYVIG VDTKIQNVGT TPVSPSVYME LVRDDQPVET PRFSHTFIGP AVYTDQHHFQ
KMTFGDIDKN KQDYATSADN GWIAMVQHYF ASAWIPQQGA KRDIYVEKID PALYRVGVKE
PVPTIAPGQT VDVSARLFAG PEEERMLEGI APGLELVKDY GWVTIIAKPL FWLLEKIHSY
VGNWGWSIVL LTLLIKAVFF PLSAASYKSM ARMKAITPRM QALRERFKGD PQKMNSALME
LYKTEKVNPF GGCLPVVIQI PVFISLYWVL LSSVEMRGAP WILWIHDLSQ QDPFFILPVL
MAVSMFLQTK LNPTPPDPVQ AKMMMFMPIA FSVMFFFFPA GLVLYYVVNN VLSIAQQYYI
TRMMGQAKTK AA
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