| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4462 |
|---|
| Symbol | dnaA |
|---|
| ID | 4002497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 192 |
|---|
| End bp | 1826 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945187 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_556591 |
|---|
| Protein GI | 91781385 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.369414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.111678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT TCTGGCAACA CTGTTCCGCA TTGCTGGAGC GTGAGCTGAC GCCCCAGCAG
TACGTGACGT GGATCAAACC GTTGGCCCCG GTCGCCTTCG ACGCCGCTGC GAACACGCTT
AGCATCGCTG CGCCGAACCG TTTCAAGCTC GACTGGGTCA AGAGCCAGTT CTCCGGCCGC
ATCGCCGATA TGGCCCGCGA TTTCTGGCAT ACCCCCATCG ACGTCCAGTT CGTGCTCGAC
CCGAAAGCCG GCATGCGCGC CCCCGCGGCA GCCGCGCCGG CACCGGCTTC CGCGCGTCCG
GCTTCCGCGC CTGGCTCGAT GGGCGGTAGC GCCGGCAACG GCGCTGCGGT GGACGCGGCT
GTCGGCGCCG TGCAAGCCGC GCAGACCGCG CGCGCAAACG GCGCGAATAG CGCGAACAAC
GCGATGGCCA ACCTCAACGC GAATGCCCGC GCGGCGGCCG AACAGAACGC AAACGCACGC
GCCGCGGCCG AAGATTCCGC CGACCTCGAT CTGCCCAGCC TCGACGCGAA CGAAGCCGCG
GCCGCCCGCC GCACGTGGCG CCCAGGCCAG AGCGCCGGTT CGAACGGCAA CGGCGAGACC
GACTCGATGT ACGAGCGCTC CAAACTGAAC CCGGTTCTGA CCTTCGACAA CTTCGTGACC
GGTAAGGCCA ACCAGTTGGC GCGCGCCGCG GCGATTCAGG TCGCGGACAA TCCCGGCATC
TCGTACAACC CGCTGTTTCT GTATGGCGGC GTGGGTCTGG GCAAGACCCA CCTGATCCAC
GCGATCGGCA ACCAGCTTCT GATGGACAAG GCGGGCGCAC GGATTCGCTA CATCCACGCG
GAACAGTACG TGTCCGACGT AGTGAAGGCG TACCAGCGCA AGGCGTTTGA CGATTTCAAG
CGCTACTACC ACTCGCTCGA CCTGCTGCTG ATCGACGATA TTCAGTTTTT CTCCGGCAAG
TCGCGCACAC AAGAGGAATT CTTCTACGCG TTTGAGGCGC TGGTCGCCAA CAAGGCGCAG
GTGATCATCA CCAGCGACAC GTATCCGAAG GAAATTTCGG GTATCGACGA CCGCCTGATC
TCGCGCTTCG ACTCCGGCCT GACCGTCGCA ATCGAGCCGC CCGAGCTGGA AATGCGCGTC
GCGATTCTGA TGCGCAAGGC GCAATCCGAG TTCGTGAGCC TGAATGAAGA CGTCGCGTTC
TTCGTCGCCA AACACTTGCG TTCGAACGTG CGTGAACTCG AAGGCGCGCT GCGCAAGATC
CTCGCGTATT CGAAGTTCCA CGGCCGCGAA ATCACGATCG AAGTCACCAA AGAAGCGCTG
AAAGACCTGC TGACGGTGCA GAACCGGCAG ATTTCGGTGG AGAACATCCA GAAGACCACG
GCTGACTTCT ACAGTATCAA GGTCGCGGAC ATGTATTCGA AGAAGCGTCC GGCGAACATT
GCGCGGCCGC GGCAGATCGC CATGTATCTG GCGAAGGAGC TGACCCAGAA GAGCTTGCCG
GAAATCGGCG AGCTGTTCGG CGGGCGCGAC CACACCACGG TGCTGCACGC GGTGCGCAAA
ATTGCCGACG AGCGCAGCAA GGACGCGCAA CTGAACCACG AACTGCATGT GCTGGAGCAG
ACGCTGAAGG GCTGA
|
|---|
| Protein sequence | MNDFWQHCSA LLERELTPQQ YVTWIKPLAP VAFDAAANTL SIAAPNRFKL DWVKSQFSGR
IADMARDFWH TPIDVQFVLD PKAGMRAPAA AAPAPASARP ASAPGSMGGS AGNGAAVDAA
VGAVQAAQTA RANGANSANN AMANLNANAR AAAEQNANAR AAAEDSADLD LPSLDANEAA
AARRTWRPGQ SAGSNGNGET DSMYERSKLN PVLTFDNFVT GKANQLARAA AIQVADNPGI
SYNPLFLYGG VGLGKTHLIH AIGNQLLMDK AGARIRYIHA EQYVSDVVKA YQRKAFDDFK
RYYHSLDLLL IDDIQFFSGK SRTQEEFFYA FEALVANKAQ VIITSDTYPK EISGIDDRLI
SRFDSGLTVA IEPPELEMRV AILMRKAQSE FVSLNEDVAF FVAKHLRSNV RELEGALRKI
LAYSKFHGRE ITIEVTKEAL KDLLTVQNRQ ISVENIQKTT ADFYSIKVAD MYSKKRPANI
ARPRQIAMYL AKELTQKSLP EIGELFGGRD HTTVLHAVRK IADERSKDAQ LNHELHVLEQ
TLKG
|
|---|
| |