| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4413 |
|---|
| Symbol | |
|---|
| ID | 4002027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 64646 |
|---|
| End bp | 65536 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945236 |
|---|
| Product | M48 family peptidase |
|---|
| Protein accession | YP_556639 |
|---|
| Protein GI | 91781433 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.631317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCG CGTTAGGGCA AGGAGTTGCA GACATGTTCA ATTGGGTCAA AACCGCGATG
TTGATGGCCG CGATCACGGC CCTTTTCATC GTGATCGGCG GGATGATCGG CGGGTCGCGC
GGCATGACGA TCGCGCTCGT GATCGCCCTT GGAATGAATT TCTTTTCGTA CTGGTTCTCG
GACAAGATGG TGCTGCGCAT GTACAACGCG CAGGAGGTCG ACGAAACCAG CGCGCCGCAG
TTCTATCGCA TGGTGCGCGA GCTTTCCACG CGCGCCGGCC TGCCCATGCC GCGCGTGTAC
CTGATCAATG AAGATGCGCC GAACGCGTTC GCCACCGGCC GCAATCCGGA GCATGCGGCG
GTCGCCGCCA CCACCGGCAT TCTGCGTGTG CTGTCCGAGC GCGAAATGCG CGGCGTGATG
GCGCATGAAC TCGCGCACGT GAAGCATCGC GACATTCTGA TTTCAACCGT CTCGGCCACG
ATGGCCGGCG CCATTTCCGC GCTGGCGAAC TTCGCGATGT TCTTCGGCGG GCGCGACGAA
AACGGTCGGC CCACGAACCC GATCGCGAGC ATTGCGGTCG CGCTGCTGGC GCCGATCGCC
GGTGCGCTGA TTCAGATGGC GATTTCGCGG GCACGTGAAT TCGAAGCCGA CCGCGGCGGC
GCACAGATTT CCGGCGACCC GCAGGCGCTC GCTTCGGCGC TCGACAAGAT CCACCGTTAC
GCGAGCGGGA TTCCGTTTCC CACCGCCGAG CAGCATCCGG CCACCGCGCA AATGATGATC
ATGAATCCGT TGGCGGGCGG CGGCATCGCG AATCTGTTCT CCACGCACCC GGCTACCGAG
GAACGCATCG CACGTTTGAT GGAAATGGCG CGCACGGGGC GCTTCGAATA A
|
|---|
| Protein sequence | MNPALGQGVA DMFNWVKTAM LMAAITALFI VIGGMIGGSR GMTIALVIAL GMNFFSYWFS
DKMVLRMYNA QEVDETSAPQ FYRMVRELST RAGLPMPRVY LINEDAPNAF ATGRNPEHAA
VAATTGILRV LSEREMRGVM AHELAHVKHR DILISTVSAT MAGAISALAN FAMFFGGRDE
NGRPTNPIAS IAVALLAPIA GALIQMAISR AREFEADRGG AQISGDPQAL ASALDKIHRY
ASGIPFPTAE QHPATAQMMI MNPLAGGGIA NLFSTHPATE ERIARLMEMA RTGRFE
|
|---|
| |