| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4412 |
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| Symbol | |
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| ID | 4002028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 65920 |
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| End bp | 67293 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637945237 |
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| Product | Fmu, rRNA SAM-dependent methyltransferase |
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| Protein accession | YP_556640 |
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| Protein GI | 91781434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.658908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATC TCGCGCCCGA GTCGCTCGGC TTCGCGCTCG ACTGCGCGGG CCAGGCTGTC
GGCGCAGTGC GTCTCGGCGC AGCGTTGCCG GCCGCGCTGC AATCCGTCTT CGTGTCCGCG
CCCGAGGGTA GCGTCGCGGC CGCGCGCGGC GCGGTGCAGG ACATCGCGTA CCGCACCATG
CGGCGTCTGG CGACCGCCGA GTGGCTGATC GCGAAGCTGG TGAAAAAGGC GCCGCCGCCG
CACGTCGGTC ATGTGCTCGC CTGTTCGCTG GCCTTGCTTG TCGACGACGA AGCGAACGCA
GCCTACGCGC CGTTCACGGT GGTCGATCAG GCGGTGAGCG CGATCGCCGC GCGTCGTGAA
TTCGCTTTTG CCAAGGGGCT CGTCAATGCC GTGCTGCGCA CTTTCCTGCG TGAGCGCGAG
ACGCTGTTGA GCGCCGCGCA AGCCGACGAA GTGGCGCGCT GGAACTACCC CGCCTGGTGG
ATCGATGCGG TGAAGCGCGC ATGGCCCGAC GCATGGCAGT CGGTGCTCGC CGCCGGCAAC
ACGCAAGGTC CGCTGACGCT GCGCGTGAAC GCGCGCCGTT CGACTGTGGA CGCCTACCTG
CAACTGCTGC AGAACCAGCA CATTGCCGCA AGCAAGGCGG GAGACTACGC CGTCAAGCTC
GCCACGCCGA TGCCCGTTGA CCGCATTCCG GGCTTCACCG ACGGTGTCGT TTCGGTGCAG
GACGCCGGCG CGCAACTCGC CGCGCAACTG CTCGGCGTGC ACGACGGTAT GCGCGTGCTC
GACGCCTGCG CCGCGCCCGG CGGCAAGACC GGCCATCTGC TCGAACTGGC CAATCTTCAG
CTCGTCGCGC TCGAAAGCGA CGCCTCGCGT GCGCGCCGGA TCGGCGAGAA CCTGCAGCGC
CTCAAGCTCG AAGCGGAAGT GCGGATCGGC GACGCCGGCA CGCCCGCGAA ATGGCACGAC
GACATCGACC AGCCATTCGA CCGCATTCTC GCCGACGTGC CGTGTTCGGC GTCGGGCATC
GTGCGGCGCC ATCCGGACAT TCGCTGGCTG CGCCGCGCGT CCGACATTCC CGCGCTGGTC
GCCGAGCAGC GCCGCATTCT CGACGCGCTG TGGCCGCTCG TGAAACCAGG CGGCGAGTTG
CTCTACGTTA CGTGTTCGAT CTTTCCCGAA GAAGGCGAGT TGCAGGCGCA GTGGTTTGGA
AACAAGTATC AGGATGCGGT ACGATTGGAC GCGCCGGGGC AGCTGTTGCC TTCAGTCGCT
CGCGCGCCCG CCGACGCATC GGCCGGTTCC CATGCCGGAC AATCCGCTGA AGACAGCGCC
GGCGCGAACT CAGACCACGA CGGATTCTTC TACGCGCGCT TCCAGAAACG GTGA
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| Protein sequence | MLHLAPESLG FALDCAGQAV GAVRLGAALP AALQSVFVSA PEGSVAAARG AVQDIAYRTM
RRLATAEWLI AKLVKKAPPP HVGHVLACSL ALLVDDEANA AYAPFTVVDQ AVSAIAARRE
FAFAKGLVNA VLRTFLRERE TLLSAAQADE VARWNYPAWW IDAVKRAWPD AWQSVLAAGN
TQGPLTLRVN ARRSTVDAYL QLLQNQHIAA SKAGDYAVKL ATPMPVDRIP GFTDGVVSVQ
DAGAQLAAQL LGVHDGMRVL DACAAPGGKT GHLLELANLQ LVALESDASR ARRIGENLQR
LKLEAEVRIG DAGTPAKWHD DIDQPFDRIL ADVPCSASGI VRRHPDIRWL RRASDIPALV
AEQRRILDAL WPLVKPGGEL LYVTCSIFPE EGELQAQWFG NKYQDAVRLD APGQLLPSVA
RAPADASAGS HAGQSAEDSA GANSDHDGFF YARFQKR
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