| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4304 |
|---|
| Symbol | |
|---|
| ID | 4003503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 182823 |
|---|
| End bp | 183716 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945346 |
|---|
| Product | putative dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_556747 |
|---|
| Protein GI | 91781541 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.172011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA CAGAATTTCG CGGCATCATT TCGTACCCCG TAACACCGTT CGATCTGCAC
GACGGCAGCG TTGATGTCCC GACGCTGAAC CGGTTGATCG ATCGTCTGGT CGACAGCGGC
TCGCACGGCA TCGCACCGCT CGGCAGCACG GGCGAAAGCG CCTATCTCAG CGACGACGAA
TGGGACACGG TGGCCGAGGC ATCGGTCAGA CGCGTGGCGA AGCGCCTGCC GGTCATTGTC
GGCATTTCCG ACCTGACGAC CCGCAACGCG GTGCGCCGTG CGAAGTTCGC CGAATCAGTG
GGCGCCGATG CGGTGATGGT GCTGCCGGTG TCTTACTGGA AGCTCAACGA AGCGGAAATC
TTCCGCCATT ACGCGACGAT CGCCGAGGCG ATCAGCGTGC CGATCATGGT GTACAACAAT
CCGGCGACGA GCGGCATCGA CATGCAGCCC GAACTGATCG TGAAGCTCGC GAGGGAGATC
GACAACGTCA CGATGATCAA GGAAAGCACC GGCGACATTC AGCGGATGCA CCGGATTGCG
CAGCTGTCGG ACGGGCGCGT GCCGTTTTTC AACGGCAGTA ATCCGCTGGC GCTCGGAGCC
TTCGCGGCAG GGGCGGCCGG GTGGTGCACG GCGGCGCCGA ACCTCGTGCC GCAATGGCCA
GTCAAGCTTT ATGAGGCTTG TGAGAAGGGT GATATGGAGC TTGCGCGAGC GGTTTTTTAT
CGCTTGCTGC CGTTCCTGCA GTGCATCATG AAGGGCGGCT TGCCGACGAC GGTGAAGGCC
GGGCTTGCGT TGCGAGGGTT TTCGGTGGGC GCGCCGCGTA GGCCGCTTCA GCCGCTTGCG
GAGCCGGCGG TGCGTGAGTT GGCGGCAGTG CTGGGGGGGC TTGAGGGCGG CTGA
|
|---|
| Protein sequence | MKSTEFRGII SYPVTPFDLH DGSVDVPTLN RLIDRLVDSG SHGIAPLGST GESAYLSDDE
WDTVAEASVR RVAKRLPVIV GISDLTTRNA VRRAKFAESV GADAVMVLPV SYWKLNEAEI
FRHYATIAEA ISVPIMVYNN PATSGIDMQP ELIVKLAREI DNVTMIKEST GDIQRMHRIA
QLSDGRVPFF NGSNPLALGA FAAGAAGWCT AAPNLVPQWP VKLYEACEKG DMELARAVFY
RLLPFLQCIM KGGLPTTVKA GLALRGFSVG APRRPLQPLA EPAVRELAAV LGGLEGG
|
|---|
| |